DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment snz and snx25

DIOPT Version :9

Sequence 1:NP_001284993.1 Gene:snz / 31704 FlyBaseID:FBgn0029976 Length:1117 Species:Drosophila melanogaster
Sequence 2:NP_001156765.1 Gene:snx25 / 793657 ZFINID:ZDB-GENE-121105-11 Length:961 Species:Danio rerio


Alignment Length:998 Identity:317/998 - (31%)
Similarity:518/998 - (51%) Gaps:129/998 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 GITLTLLAVIWYYPTFFL-FFAFVVYSLVLVFAAVAGTVYIHYIFTTNEPTPPSRVPSRLLYNAT 117
            |:.||         :||| .|.:|.::|   |..:.|:      |.......|.|: ||  ::.|
Zfish    44 GLGLT---------SFFLKLFIYVSFAL---FCFLLGS------FGLLVKKSPLRI-SR--FDTT 87

  Fly   118 K---SNIFDLPKPIKNPSNLPL---------IFGKTVDLQLQQIIEYVLRDFMLPWLGYVVTKPK 170
            |   ..:.||...:.....:||         :....||..|:::.:|..||::|.|...:.....
Zfish    88 KRQSDKLVDLFNKLMGRFCVPLLDSAQTRRVVVSLNVDKALKEVFDYSYRDYILSWYVPLSRDEG 152

  Fly   171 LINDVVREDLWNAIQKIHERALRMDAAKIIAVDMVNRVTVHLEKIRIAEARAAETNTPPVFSTNS 235
            .:..::.||.|..|:::..|...:|...::..|||..:..|...::.|..|..|...|  |..:.
Zfish   153 QLYQMLSEDFWEMIKQVRMRLSEVDVVNLVCNDMVKTLHQHFCDLKAANTRLEEVPRP--FPLHP 215

  Fly   236 YLADEEKEMEFLRKLCEIMVILLLP-RGYSLPPLKVLLSEILSYKIFFPMIKMLTAPDYINQKVV 299
            .|...::|:.|||....::::.||| |......|::||.|:::.|:..|::.:|:.|||||:.::
Zfish   216 CLQSPDEELRFLRCCARLLLLRLLPVRDARSRSLRLLLVEVVTTKVLKPLVDVLSDPDYINRMLL 280

  Fly   300 QNIETRLAAAAMSKRSYEYAASFEDFLKIINNSGNLEELSLIRKSIVNDLMHATTMQN---LQRA 361
            ..:|.|.......|::|.||.|:|:|:|:|::|..::.|..:|..||.:::.|||:.:   |:|.
Zfish   281 AQLEHREQVNEHHKKAYTYAPSYEEFIKLISSSSGIQFLKQLRYQIVVEIIQATTISSIPQLKRQ 345

  Fly   362 KGLDPDHEDHSLSKSELTAAVRLKRYVRQLTMAKGECEKNLAKFGWNGNYSSDID---------- 416
            |  |...::.:..|::|..|..:|||:.|||:||.:|||.:...| ..||....|          
Zfish   346 K--DSKGKEAAALKADLLRARNMKRYINQLTVAKKQCEKRIRLLG-GPNYEQQEDGGQEEGDGPQ 407

  Fly   417 ----LTLVEILNTAVGRRYFTLFLEPLKASALIGFYLAVEEIKHAHKSASHQLGTEIFYTYIRVP 477
                |...||::.:|.|.:|.:::|.:...|||.|:..||.:|.|:|:...||..||:..:. |.
Zfish   408 SQRILQFEEIMSNSVYRDHFRVYMERVDKRALISFWELVEMLKTANKNEVPQLVGEIYQNFF-VE 471

  Fly   478 KSEIQIDKHERKLIETFLLGDAEPDIFYDIQRNVLRTLEEKYYPPFVLSDQYRQL-------KEA 535
            ..||.::|...|.|:..|:|:...|:|:.||.:|..|::|:|||.|::||.|.:|       ..:
Zfish   472 SREIPVEKALYKEIQQTLVGNKGTDVFHRIQGDVYETMKERYYPSFLVSDLYERLIKREEQRSSS 536

  Fly   536 LDSNEIADPTLLMCHTIGDVQEPLADEQPGAADGLNGGAGGAIDVAAHTSYARRKLEQIQERIDK 600
            ..|:|..|.|       |.|.|       |....|:.|:.|   :....|||..||.|:.||::.
Zfish   537 QSSSEEKDDT-------GQVME-------GGDVALDEGSKG---INEQASYAATKLHQLYERLEY 584

  Fly   601 KNQALDALKYSVKPESKVLTILEKEMEWLKSEKRQTEAHLRRTDAWTEHLGKWKATIQSVEVSDE 665
            |.|||.:::.:.:|:.|::::|:.|:..::.|....|.|:.|||.|.|:||.|:|.:.:.|.|:|
Zfish   585 KRQALGSIQNAPRPDKKIVSLLKDEISAMEKEHSDLELHISRTDCWCENLGTWRAVVSTAEASEE 649

  Fly   666 --KESLQFMILVHVDEDINAPVQPTSSKNGDSGHANLRKRPSGISSGWVVMRSLNQVHELQRKLR 728
              ::...:.:.|.:.|:       ...||                :.|.|.|.|.:...|.|||.
Zfish   650 NGEQMACYFVAVSLSEE-------DDCKN----------------NHWTVSRKLIEFQALHRKLT 691

  Fly   729 HVSSNLKAIDLPTNFKFFFLKTDRHGQEKAKSQIQKFLNFILEDDHLNGSEAIYTFLSPSSDHLK 793
            ....:||.:.||:..|..|...|:...:|:|:|:..||..:|.|:.:..|||:|.|||||.:|||
Zfish   692 ECFPSLKKVQLPSLSKLPFKSIDQKFLDKSKNQLNAFLQKVLTDERMCQSEALYAFLSPSPEHLK 756

  Fly   794 QSLPSPKKSKFSLSTLFRSDAGK--AHEASKATDPFWGLQRDDEDISTYLDGESGGEAKMLAADL 856
             .:...|||.|||::......|.  :|:..:|        .||.|:|.|.|...|          
Zfish   757 -VIDIQKKSSFSLASFLERLPGDFFSHQEDEA--------EDDSDLSDYGDEPDG---------- 802

  Fly   857 DSKDSIAEPMYALMGEIFDMGGVFKWLRKSLISFVQITYGRTINRQIRESVAYLFEESMLHNYFS 921
             .||::|||.:.|:||||::.|:|||:||:||:.||:|:|||||:|||::|.::|.|.|:..|.:
Zfish   803 -KKDALAEPCFMLIGEIFELRGMFKWVRKTLIALVQVTFGRTINKQIRDTVNWIFSEQMMVYYIN 866

  Fly   922 AILKSFWPGGVLASAYPTRSEDMREMTTTAAKALLTDHIPEVLCNLVGAQAAKRGVLKVFDALQN 986
            ....:|||.|.||....:|.|..|..|...|:..|.|:||:.|.||||.|.|:.|::|:|:|||.
Zfish   867 VFRDTFWPNGKLAPHNKSRCESERRETKERAQQKLLDNIPDALQNLVGQQNARYGIIKIFNALQE 931

  Fly   987 PAYNKQLFYELLEILMIEFFPEI 1009
            .:.|:.|.|.|||:|:.|.:.|:
Zfish   932 SSANRHLLYMLLEMLVKELYAEL 954

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snzNP_001284993.1 PXA 142..299 CDD:280373 44/157 (28%)
RGS_SNX25 422..531 CDD:188675 40/108 (37%)
PX_SNX25 645..788 CDD:132788 42/144 (29%)
Nexin_C 882..987 CDD:285792 49/104 (47%)
snx25NP_001156765.1 PXA 124..283 CDD:280373 44/160 (28%)
RGS 417..525 CDD:295367 40/108 (37%)
PX_SNX25 630..751 CDD:132788 42/143 (29%)
Nexin_C 827..930 CDD:285792 47/102 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595317
Domainoid 1 1.000 103 1.000 Domainoid score I6762
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H23744
Inparanoid 1 1.050 469 1.000 Inparanoid score I1485
OMA 1 1.010 - - QHG50023
OrthoDB 1 1.010 - - D104136at33208
OrthoFinder 1 1.000 - - FOG0006633
OrthoInspector 1 1.000 - - oto39958
orthoMCL 1 0.900 - - OOG6_106742
Panther 1 1.100 - - O PTHR22775
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6390
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1312.910

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