DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment snz and Snx16

DIOPT Version :9

Sequence 1:NP_001284993.1 Gene:snz / 31704 FlyBaseID:FBgn0029976 Length:1117 Species:Drosophila melanogaster
Sequence 2:NP_083344.3 Gene:Snx16 / 74718 MGIID:1921968 Length:344 Species:Mus musculus


Alignment Length:373 Identity:67/373 - (17%)
Similarity:117/373 - (31%) Gaps:138/373 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   555 VQEPLADEQPGAADGLNGGAGGAIDVAAHTSYARRKLE----------QIQERIDKKNQAL---- 605
            |..|:.:......:..|..:.....|:..::.::.:||          .:|:::|..:...    
Mouse     8 VPMPIGNSASSFTNNRNQRSSSFGSVSTSSTSSKGQLEDSAVGSLKQTNVQDQMDSASSMCGSPL 72

  Fly   606 ---------DALKYSVKPESKVLTILEKEMEWLKSEKRQTEAHLRRTDAWTEHLGKWK-----AT 656
                     .:::||.:|.              ::|::..||            ..|:     .|
Mouse    73 IRTKFTGTDSSIEYSARPR--------------EAEEQHPEA------------VNWEDRPSTPT 111

  Fly   657 IQSVEVSDEKESLQ-FMILVHVDEDINAPVQPTSSKNGDSGHANLRKRPSGISSGWVVMRSLNQV 720
            |...||.:|:.... :.|||                         :|.|   ...|||.|.....
Mouse   112 ILGYEVMEERAKFTVYKILV-------------------------KKSP---EESWVVFRRYTDF 148

  Fly   721 HELQRKLRHVSSNLKAIDLP------TNFKFFFLKTDRHGQEKAKSQIQKFL-NFI--------- 769
            ..|..||:.:....: :.||      .|:...||:..:.|       :|.|| |.:         
Mouse   149 SRLNDKLKEMFPGFR-LALPPKRWFKDNYNAEFLEDRQLG-------LQAFLQNLVAHKDIANCL 205

  Fly   770 -------LED-----DHLNGSEAIYTFLSPSSDHLKQSLPSPKKSKFSLSTL-----FRSDAGKA 817
                   |:|     |.|..|.|....|..::.||::.|...:|...||..|     ...||.:.
Mouse   206 AVREFLCLDDPPGPFDSLEESRAFCETLEETNYHLQRELLEKQKEVESLKKLLGEKQLHIDALET 270

  Fly   818 HEASKATDPFWGLQRDDEDISTYLDGESGG-----EAKMLAADLDSKD 860
            ...:.:.:|         ..|.|:....||     |..:|..:.|..|
Mouse   271 RIRTLSLEP---------GASLYVSRAEGGQILRVEPSVLQVNRDVLD 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snzNP_001284993.1 PXA 142..299 CDD:280373
RGS_SNX25 422..531 CDD:188675
PX_SNX25 645..788 CDD:132788 35/176 (20%)
Nexin_C 882..987 CDD:285792
Snx16NP_083344.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..72 8/63 (13%)
PX_SNX16 105..214 CDD:132809 27/144 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2101
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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