DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment snz and sgk3

DIOPT Version :9

Sequence 1:NP_001284993.1 Gene:snz / 31704 FlyBaseID:FBgn0029976 Length:1117 Species:Drosophila melanogaster
Sequence 2:NP_001103937.1 Gene:sgk3 / 564523 ZFINID:ZDB-GENE-070424-62 Length:486 Species:Danio rerio


Alignment Length:376 Identity:78/376 - (20%)
Similarity:131/376 - (34%) Gaps:132/376 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   678 DEDINAPVQPTSSKNGDSG-HANLRKRPSGI---------SSGWVVMRSLNQ------VHELQRK 726
            |||..:   .::|:|.:.| .||...:|:..         |.|.|::....:      :..||:|
Zfish   125 DEDDKS---NSTSRNINLGPSANPHAKPTDFDFLKVIGKGSFGKVLLAKRKRDGKCYAIKVLQKK 186

  Fly   727 L-------RHVSSN----LKAIDLP--TNFKFFFLKTDRHGQEKAKSQIQKFLNFILEDDHLNGS 778
            :       :|:.:.    ||.:..|  ....:.|..||:             |.|:|  |.:||.
Zfish   187 VILNRREQKHIMAERNVLLKNVKHPFLVGLHYSFQTTDK-------------LYFVL--DFVNGG 236

  Fly   779 EAIYTFLSPSSDHL--KQSLPSPKKSKFSLSTLFRSDAGKAHEASKATDPFWGLQRDDEDISTYL 841
            |..:        ||  :::.|.| ::||.::.: .|..|..|..:.       :.||.:..:..|
Zfish   237 ELFF--------HLQKERTFPEP-RAKFYIAEM-ASALGYLHSLNI-------VYRDLKPENILL 284

  Fly   842 DGESGGEAKMLAADLD-SKDSIAE----------PMYALMGEIFDMGGVFKWLRKSLISFVQITY 895
            |    .:..::..|.. .|:.|::          |.| |..|:         |||.       .|
Zfish   285 D----SQGHIVLTDFGLCKEGISQADTTTTFCGTPEY-LAPEV---------LRKQ-------PY 328

  Fly   896 GRTINRQIRESVAYLFEESMLHNYFSAILKSFWPGGVLASAYPTRSEDMREMTTTAAKALLTDHI 960
            ..|::.....||.|    .||:.     |..|:            |.|..||         .|:|
Zfish   329 DNTVDWWCLGSVLY----EMLYG-----LPPFY------------SRDTHEM---------YDNI 363

  Fly   961 PEVLCNLVGAQAAKRGVLKVFDALQNPAYNKQLFY--ELLEILMIEFFPEI 1009
              :...||....|......:...|....:.::|.|  :..|:...|||..|
Zfish   364 --LHKELVMRPGASTAAWSILQTLLEKDHTRRLGYRDDFNEVKEHEFFSSI 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snzNP_001284993.1 PXA 142..299 CDD:280373
RGS_SNX25 422..531 CDD:188675
PX_SNX25 645..788 CDD:132788 29/138 (21%)
Nexin_C 882..987 CDD:285792 22/104 (21%)
sgk3NP_001103937.1 PX_CISK 6..114 CDD:132780
S_TKc 152..409 CDD:214567 66/341 (19%)
STKc_SGK3 155..480 CDD:270755 69/343 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2101
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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