DRSC/TRiP Functional Genomics Resources

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Protein Alignment snz and snx22

DIOPT Version :9

Sequence 1:NP_001284993.1 Gene:snz / 31704 FlyBaseID:FBgn0029976 Length:1117 Species:Drosophila melanogaster
Sequence 2:NP_001038839.2 Gene:snx22 / 561624 ZFINID:ZDB-GENE-060825-154 Length:220 Species:Danio rerio


Alignment Length:128 Identity:24/128 - (18%)
Similarity:50/128 - (39%) Gaps:17/128 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   713 VMRSLNQVHELQRKLRHVSSNLKAIDLPTNFKFFFLKTDRHGQ----EKAKSQIQKFLNFILEDD 773
            |:|...:...|.||::.:   |:..|.|:       |.::|.:    |:.:.:::.::..||..:
Zfish    45 VLRRHGEFQTLHRKVKKI---LRVPDFPS-------KRNQHLRTKPLEQRRQELEDYIQVILYQN 99

  Fly   774 HLNGSEAIYTFLSPSSDH--LKQSLPSPKKSKFSLSTLFRSDAGKAHEASKATDPFWGLQRDD 834
            .:...| :..||.....|  .|.......:|.:.....:|..:........:.||:....|.|
Zfish   100 DVVPQE-LLDFLQVKHFHPTSKNCSSDENQSDYCREQEYRYQSFHQRVVGFSADPYQLESRSD 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snzNP_001284993.1 PXA 142..299 CDD:280373
RGS_SNX25 422..531 CDD:188675
PX_SNX25 645..788 CDD:132788 16/78 (21%)
Nexin_C 882..987 CDD:285792
snx22NP_001038839.2 PX_SNX22 11..121 CDD:132790 17/86 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2101
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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