DRSC/TRiP Functional Genomics Resources

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Protein Alignment snz and pxk

DIOPT Version :10

Sequence 1:NP_572421.1 Gene:snz / 31704 FlyBaseID:FBgn0029976 Length:1117 Species:Drosophila melanogaster
Sequence 2:NP_001076277.1 Gene:pxk / 557065 ZFINID:ZDB-GENE-050208-393 Length:575 Species:Danio rerio


Alignment Length:434 Identity:87/434 - (20%)
Similarity:157/434 - (36%) Gaps:114/434 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   681 INAPVQPTSSKNGDSGHANLRKRPSGISSGWVVMRSLNQVHELQRKLRHVSSNLKAIDLPTNFKF 745
            ::|.::.:.|....:.:....:|.....:.|.|:|..:....|...|.     :..::||...|.
Zfish    24 LSAVIEASQSLQSHTEYIIRVQRGVSTDNSWTVIRRYSDFDMLNNSLL-----ISGLNLPLPPKK 83

  Fly   746 FFLKTDRHGQEKAKSQIQKFLNFILEDDHLNGSEAIYTFLSP---SSDHLKQSLPSPKKSKFSLS 807
            .....||....:.:..:|.:||:|.:...|...|.:..||..   |:::.:.:|.       .:|
Zfish    84 LLGNMDREFIAERQKGLQAYLNYITQHHILCSCELVKKFLDTNNYSANYTEIALQ-------QVS 141

  Fly   808 TLFRSDAGKAHEASKATDPFWGLQR-----DDED------ISTYLDGESGGEAKMLA-ADLD--- 857
            ..||||. |........|..|.|::     .|:|      :.:::|   .|..|.|: .||.   
Zfish   142 MFFRSDP-KWEVIEPLKDIGWRLRKRYFLVKDKDQPKEKQVLSWVD---LGPDKFLSDKDLQSAM 202

  Fly   858 ------SKDSIAEPMYALMGE-------IFDMGGVFK-----------WLRK----SLISFVQIT 894
                  |..:|:...:|...|       :|...|..:           :|||    ..|..:::.
Zfish   203 KLLPTLSHSNISPVSFATTSESSALIIRVFSEKGTLRDHICKVKPKEPFLRKYCNPKKIQGLELQ 267

  Fly   895 YGRTINRQIRESVAYLFEESMLHNYFSAI-------------LKSFWPGGVLASAYPTRSEDMRE 946
            ..||..|||.|::.:|.::...:.:..|.             :::...|  |.|.|.......|:
Zfish   268 QIRTFGRQILEALKFLHDKGFPYGHLHASNVLIEENTCKLLDVENSLLG--LPSYYRPYVTQFRK 330

  Fly   947 MTTTAA-------------------KALLTDHIP--------EVLCNLVGAQAAKRGVLKVFDAL 984
            :.||.:                   .|:..|..|        .||.:::..:|.|.|:..|...|
Zfish   331 INTTESIDVYSFGHLLYEMTYGRPPDAVPVDQCPPAPFSSIVSVLQSILSTEACKTGMPTVSQLL 395

  Fly   985 QNPAYNKQLFYELLEILMIEFFPEIRQLRVSNSNGTKLNTATAG 1028
            |.|     |||::|     .|..|..|.::|:.....|.::..|
Zfish   396 QTP-----LFYDVL-----LFNSEKPQFKISSKLKEALKSSKEG 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snzNP_572421.1 PXA 142..300 CDD:460484
RGS_SNX25 422..531 CDD:188675
PX_SNX25 645..788 CDD:132788 21/109 (19%)
Nexin_C 882..987 CDD:462541 30/148 (20%)
pxkNP_001076277.1 PX_MONaKA 17..136 CDD:132781 22/116 (19%)
Protein Kinases, catalytic domain 202..349 CDD:473864 25/148 (17%)
WH2_DdVASP-like 543..573 CDD:409205
actin-binding sequence 562..565 CDD:409205
Blue background indicates that the domain is not in the aligned region.

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