DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment snz and snx14

DIOPT Version :9

Sequence 1:NP_001284993.1 Gene:snz / 31704 FlyBaseID:FBgn0029976 Length:1117 Species:Drosophila melanogaster
Sequence 2:XP_005160372.1 Gene:snx14 / 555970 ZFINID:ZDB-GENE-040724-144 Length:942 Species:Danio rerio


Alignment Length:1093 Identity:215/1093 - (19%)
Similarity:382/1093 - (34%) Gaps:314/1093 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 YPTFFLFFAFVVYS----------LVLVFAAVAGTVYIHYIFTTNEPTPPSRVPSRLLYNATKSN 120
            ||..|..|..::.|          |::.::.:||.:..:...     :|...:|:.|:...||. 
Zfish    27 YPVIFCIFTVMISSTIILNQYLHILMVFWSFLAGVITFYCSL-----SPEYLLPNILISIKTKR- 85

  Fly   121 IFDLPKPIKNPSNLPL-----IFGKT-------------------------VDLQLQQIIEYVLR 155
                 ||.:.....||     :.||.                         ||..:.:::|.||.
Zfish    86 -----KPQEQHELFPLGHSCAVCGKNQCKRHRPTLLLENYQPWLNLKVPSKVDASISEVLELVLE 145

  Fly   156 DFMLPWLGYVVTKPKLINDVVREDLWNAIQKIHERALRMDAAKIIAVDMVNRVTVHLEKIRIAEA 220
            :|:.||. ..:|..:...|.:|:.:......:..||.|:|...::...|:.....|:|.|..|:.
Zfish   146 NFVYPWY-RDITDDEACVDELRQTIRFFAAVLAHRAQRVDVPSVVMDKMMKAAMKHIEIIAKAQQ 209

  Fly   221 RAAETNTPPVFSTNSYLAD-------EEKEMEFLRKLCEIMVILLLPRGYSLPP-------LKVL 271
            :...|:.....:...|.||       .:.|:.:||||.|    ||.|  |.:||       |.:|
Zfish   210 KVRNTDGLEQAALAEYGADLHVALRSRKDELLYLRKLTE----LLFP--YVMPPKATDCRSLALL 268

  Fly   272 LSEILSYKIFFPMIKMLTAPDYINQKVVQNIETRLAAAAMSKRSYEYAASFEDFLKIINNSGNLE 336
            :.|:::..:|.|::..:..||.:|..|:..|:                                 
Zfish   269 IREVMTGSVFLPIMDFVADPDTVNHMVLIFID--------------------------------- 300

  Fly   337 ELSLIRKSIVNDLMHATTMQNLQRAKGLDPDHEDHSLSKSELTAAVRLKRYVRQLTMAKGECEKN 401
                                          |.....::....|....|:|:....|         
Zfish   301 ------------------------------DSPPEPVTDPPSTLVPFLERFADPRT--------- 326

  Fly   402 LAKFGWNGNYSSDIDLTLVEILNTAVGRRYFTLFLEPLKASALIGFYLAVEE---------IKHA 457
                    ..||.:.|.|.||.........|..||:...|..::.|.|.|||         :...
Zfish   327 --------KKSSVLKLDLKEIREQQDLLFRFMSFLKEEGAVHVLQFCLTVEEFNDRILCPDLSDD 383

  Fly   458 HKSASHQLGTEIFYTYIRVPKSEIQIDKHERKLIETFLLGD----AEPD-----------IFYDI 507
            .|...|:...:|:.||.    .|..|||..   .:.|::.:    ||..           ..::.
Zfish   384 EKQRLHEEVKKIYETYC----LEESIDKIS---FDPFIIEEIHSIAEGPYTGVVKLQTMRCLFEA 441

  Fly   508 QRNVLRTLEEKYYPPFVLSDQYRQLKEALDSNEIADPTLLMCHTIGDVQEPLADEQPGAADGLNG 572
            ..:||..||:.:.|.|..||:|.:              .|:|          ..|.|.....||.
Zfish   442 YEHVLCLLEKVFTPMFCHSDEYFR--------------HLLC----------GAESPARNSKLNR 482

  Fly   573 GAGGAIDVAAHTSYARRKLEQIQ-ERIDKKNQAL---DALKYSVKPESKVL-----TILEKEMEW 628
            ..  ::|...:||   ::.|... .||..|.:.:   ..::.::.|:..::     |:.|..|.:
Zfish   483 NL--SLDDLRNTS---KRGESFGISRIGSKIKGVFKSSTMEGAMLPQYAMIEGEDDTVEEAVMVF 542

  Fly   629 LKSEKRQTEA-----HLRRTDAWTEHLGKWKATIQSVEVSDEKESLQFMILVHVDEDINAPVQPT 688
            ........:|     .||...|||       .:|..|:..|::...:.:.:..:|      |:..
Zfish   543 EDDSPGPMDAVGTPGTLRNLSAWT-------ISIPYVDFYDDEVKKERIPVFCID------VERN 594

  Fly   689 SSKNGDSGHANLRKRPSGISSGWVVMRSLNQVHELQRKLRHVSSNLKAIDLPT-------NFKFF 746
            ..||  .||.         :..|.|.|...:.:.|:.||.......:...||:       |::|.
Zfish   595 DRKN--VGHE---------TESWSVYRKYVEFYVLESKLTEFHGPFQDAQLPSKRIIGPKNYEFL 648

  Fly   747 FLKTDRHGQEKAKSQIQKFLNFILEDDHLNGSEAIYTFLSP---SSDHLKQSLPSPKKSKFSLST 808
            ..|         :.:.:::|..:|....|:.|:.:..||||   .|....:.||.     .:|..
Zfish   649 SSK---------RGEFEEYLQKLLHHPELSNSQLLADFLSPFSMESQFRDKMLPD-----VNLGK 699

  Fly   809 LFRSDAGK-AHEASKATDPFWGLQRDDEDISTYLDGESGGEAKMLAADLDSKDSIAEPMYA---- 868
            :|:|..|| ..|..:..:||  :|.......:.....|..|..:|:...::...:...:|.    
Zfish   700 IFKSVPGKLIKEKGQNLEPF--IQSFFSSCESPKPKPSRPELTILSPTAENNKKLFNELYRNNAN 762

  Fly   869 ------------LMGEIFDMGG-----------VFK---WLRKSLISFVQITYGRTINRQIRESV 907
                        ...|:.::.|           ||:   ||. .|:|.|:|...||:...:....
Zfish   763 LPEGLEKKHNQNYFMELMEVDGAYDYMMYIGRVVFRMPDWLH-HLLSGVRILLKRTLEAYVGHYF 826

  Fly   908 AYLFEESM-LHNYFSAILKSFWPGGVLASAYPTRSEDMREMTTTAAKALLTDHIPEVLCNLVGAQ 971
            .|..|:.| .|...|  |.:.....|...:...||.:.::.........:.:::|:::...:|.:
Zfish   827 QYKLEQIMEEHRLVS--LVTLLRDAVFCESTEERSPEDKQRRAKQTFEEMMNYLPDIVGKCIGEE 889

  Fly   972 AAKRGVLKVFDALQNPAYNKQLFYELLEILMIEFFPEIRQLRVSNSNGTKLNT 1024
            |...||..:|:.:|.|..|||:.|.||:|.:.|.|||:.:   :...|..::|
Zfish   890 AKYDGVKMLFNTIQQPLLNKQMTYVLLDIAIQELFPELSK---NQKQGLSVST 939

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snzNP_001284993.1 PXA 142..299 CDD:280373 44/170 (26%)
RGS_SNX25 422..531 CDD:188675 31/132 (23%)
PX_SNX25 645..788 CDD:132788 31/152 (20%)
Nexin_C 882..987 CDD:285792 24/105 (23%)
snx14XP_005160372.1 PXA 130..299 CDD:280373 45/175 (26%)
RGS_SNX14 339..465 CDD:188677 31/132 (23%)
PX_SNX14 563..681 CDD:132787 30/150 (20%)
Nexin_C 802..905 CDD:285792 24/105 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2101
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1370
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

Return to query results.
Submit another query.