DRSC/TRiP Functional Genomics Resources

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Protein Alignment snz and snx21

DIOPT Version :9

Sequence 1:NP_001284993.1 Gene:snz / 31704 FlyBaseID:FBgn0029976 Length:1117 Species:Drosophila melanogaster
Sequence 2:NP_001070836.1 Gene:snx21 / 555580 ZFINID:ZDB-GENE-061013-557 Length:395 Species:Danio rerio


Alignment Length:325 Identity:62/325 - (19%)
Similarity:109/325 - (33%) Gaps:86/325 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   537 DSNEIADPTLLMCHTIGDVQEPLADEQPGAADGLNGGAGGAIDVAAHTSYARRKLEQIQERIDKK 601
            :|:|:.|....:...:|..   |..|..|..|..:.|     ||:...|.:    :...|.||..
Zfish    33 ESSELEDDIDCVSARLGGT---LCFEADGVLDSEDAG-----DVSGPDSDS----DFFGESIDNA 85

  Fly   602 NQALDALKYSVKPESKVLTILEKEMEWLKSEKRQTEAHL--RRTDAWTEHLGKWKATIQSVEVSD 664
            ..:.:.......|:|..:...:.:..|..|..|.....|  ..|||...|....|..:.::.|  
Zfish    86 CSSTETSPIGPSPKSSNMLTRQLQENWRNSRARCVPEKLIFEVTDASVVHETNSKYVLYTIHV-- 148

  Fly   665 EKESLQFMILVHVDEDINAPVQPTSS-KNGDSGHANLRKRPSGISSGWVVMRSLNQVHELQRKLR 728
                      :|.......|...|.. .:.:..|:.||:...|         :::.|:..::|||
Zfish   149 ----------IHAGTFDKTPAVITRRYTDFERLHSRLRRHYGG---------NIDGVYFPRKKLR 194

  Fly   729 --------------------HVSSNLKAIDLPTNFKFFFLKTDRHGQ-----EKAKSQIQKFLNF 768
                                |:.|.......||..:||:|...|.||     .:.:..:...||.
Zfish   195 KNFAAETIAKRSRAFEQYLTHLHSLPDLRTTPTFLEFFYLGDLRAGQMLMRVGRYQDALHSLLNS 259

  Fly   769 I-LEDD-------HLNGSEAIYTFLSPSSDHLKQSLPSPKKSKFSLSTLFRSDAGKAHEASKATD 825
            : |::.       .||..:.::.|.:.|                :|.|.|: |..:.:||.:..|
Zfish   260 LRLQEKLGCHQLLQLNQLQRVHWFFTLS----------------ALVTCFQ-DLEQLNEAQEHCD 307

  Fly   826  825
            Zfish   308  307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snzNP_001284993.1 PXA 142..299 CDD:280373
RGS_SNX25 422..531 CDD:188675
PX_SNX25 645..788 CDD:132788 31/176 (18%)
Nexin_C 882..987 CDD:285792
snx21NP_001070836.1 PX_SNX21 124..235 CDD:132834 24/131 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2101
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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