DRSC/TRiP Functional Genomics Resources

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Protein Alignment snz and snx16

DIOPT Version :10

Sequence 1:NP_572421.1 Gene:snz / 31704 FlyBaseID:FBgn0029976 Length:1117 Species:Drosophila melanogaster
Sequence 2:NP_991228.1 Gene:snx16 / 402964 ZFINID:ZDB-GENE-040426-1832 Length:294 Species:Danio rerio


Alignment Length:151 Identity:34/151 - (22%)
Similarity:64/151 - (42%) Gaps:26/151 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   488 RKLIETFLLGDAEPDIF--YDIQRNVLRTLEEKYYPPFVLSDQYRQL-KEALDSNEIADPTLLMC 549
            |:..:...|.|...|:|  :.:.....|..::.|...|:   :.||| .:....|.:|...:..|
Zfish   101 RRYTDFSRLNDKLKDMFPGFRLSLPPKRWFKDNYETEFL---EERQLGLQTFLQNLVAHKDIASC 162

  Fly   550 HTIGDVQEPLA-DEQPGAADGLNGGAGGAIDVAAHTSYARRKLEQIQERIDKKNQALDALKYSVK 613
            ..   |:|.|. |:.||..|.|. .:....:.....:|      ::|:.:.:|.:.:::||.   
Zfish   163 VA---VREFLCLDDPPGPFDSLE-ESRAFCETLEECNY------RLQKELLEKQREINSLKE--- 214

  Fly   614 PESKVLTILEKEMEWLKSEKR 634
                  |:.|||::..|.|:|
Zfish   215 ------TLEEKELQIQKLEER 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snzNP_572421.1 PXA 142..300 CDD:460484
RGS_SNX25 422..531 CDD:188675 8/44 (18%)
PX_SNX25 645..788 CDD:132788
Nexin_C 882..987 CDD:462541
snx16NP_991228.1 PX_SNX16 63..172 CDD:132809 17/76 (22%)
Mplasa_alph_rch <180..>231 CDD:275316 13/66 (20%)
Blue background indicates that the domain is not in the aligned region.

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