DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment snz and snx15

DIOPT Version :9

Sequence 1:NP_001284993.1 Gene:snz / 31704 FlyBaseID:FBgn0029976 Length:1117 Species:Drosophila melanogaster
Sequence 2:NP_001104707.1 Gene:snx15 / 393352 ZFINID:ZDB-GENE-040426-1377 Length:398 Species:Danio rerio


Alignment Length:442 Identity:80/442 - (18%)
Similarity:137/442 - (30%) Gaps:159/442 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   462 SHQLGTEIFYTYIRVPKSEIQIDKHERKLIETFLLGDAEPDIFYDI------------------- 507
            |.:...|.:|.:..|.........|....:....:...:|:...::                   
Zfish     2 SRKTKKEEYYRFFSVTDPRTHEKGHTEYKVTARFVSKTQPENVKEVVVWKRYTELKKLHGELAYT 66

  Fly   508 QRNVLRTLEEKYYPPFVLSDQYRQLKEAL--DSNEIADPTLLMCHTI---------------GDV 555
            .||:.|..||  :|||..:..:.:..||:  :....|:..||....|               |:|
Zfish    67 HRNLFRRQEE--FPPFPRAQVFGRFDEAVIEERRNAAEAMLLFTTNIPALYNSPQLKEFFRDGEV 129

  Fly   556 QEP------------------------LADEQPGAADGLNGGAGGAIDVAAHTSYARRKLEQIQE 596
            :.|                        ||:|:.|....:                      |.||
Zfish   130 RRPLETAVISTSLPPPLIPLPERSADLLAEEETGTEAPI----------------------QAQE 172

  Fly   597 RIDKKNQALDALKYSVKPESKVLTILEKEMEWLKSEKRQTEAHLRR-TDAWTE---------HLG 651
             :| .||.|..|   .:||..|..:.:....  .:::.||:|.::. |:..||         |.|
Zfish   173 -LD-SNQRLTDL---TQPEIAVEALSDTRSS--PTQETQTDAEIQELTEKETEDDSTTHENNHTG 230

  Fly   652 KWKA------TIQSVEVS----DEKESLQFM--------------ILVHVDEDINAPVQPTSSKN 692
            :..|      |..|.|:.    |:.|....:              :|...|..|..|........
Zfish   231 QCTAATDDSTTHASPEMPGSPIDQLEEFDALFDSGLEDYSFKAPPLLSDTDLAIFDPCVKEDQPY 295

  Fly   693 GDSGHANLRKRP--------SGISSGWVVM--RSLNQVHELQRKLRH---VSSNLKAIDLPTNFK 744
            |...||.|...|        |.:...:|..  ..||...|.:|:..:   |.....|:|:     
Zfish   296 GSPSHAELLSAPLCGSNGTDSAVDVSYVYQANEELNAAQEQEREGNYSTAVQRYRAAVDI----- 355

  Fly   745 FFFLK-----TDRHGQEKAKSQIQKFLNFILEDDHLNGSEAIYTFLSPSSDH 791
              |:|     .|...::..|.:|.:.|      :|   :|.:.:..:|:.:|
Zfish   356 --FMKGVQGDVDLKRRDAVKRKIAEVL------EH---AERLLSIQTPTHNH 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snzNP_001284993.1 PXA 142..299 CDD:280373
RGS_SNX25 422..531 CDD:188675 14/87 (16%)
PX_SNX25 645..788 CDD:132788 36/193 (19%)
Nexin_C 882..987 CDD:285792
snx15NP_001104707.1 PX_SNX15 10..127 CDD:132821 18/118 (15%)
MIT_SNX15 321..395 CDD:239140 17/89 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2101
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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