DRSC/TRiP Functional Genomics Resources

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Protein Alignment snz and Snx15

DIOPT Version :9

Sequence 1:NP_001284993.1 Gene:snz / 31704 FlyBaseID:FBgn0029976 Length:1117 Species:Drosophila melanogaster
Sequence 2:NP_001019923.1 Gene:Snx15 / 293691 RGDID:1305803 Length:338 Species:Rattus norvegicus


Alignment Length:393 Identity:75/393 - (19%)
Similarity:134/393 - (34%) Gaps:119/393 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   630 KSEKRQTEAHLRRTDAWTEHLG--KWKATIQSVEVSDEKESLQFMILVHVDEDINAPVQPTSSKN 692
            :::|.....|...:|..|...|  ::|.|.|.:...|.::..:.::.....:        ....:
  Rat     4 RAKKDDFLRHYTVSDPRTHPKGYTEYKVTAQFISKKDPEDIKEVVVWKRYSD--------FRKLH 60

  Fly   693 GDSG--HANLRKR----PSGISSGWVVMRSLNQVHELQRK----LRHVSSNLKAIDLPTNFKFFF 747
            ||..  |.||.:|    |: .....|..|....|.|.:||    |...:..:.|::.....|.||
  Rat    61 GDLAYTHRNLFRRLEEFPA-FPRAQVFGRFEASVIEERRKGAEDLLRFTVPIPALNNSPQLKEFF 124

  Fly   748 LKTDRHGQEKAKSQIQKFLNFILEDDHLNGSEAIYTFLSPSSD--HLKQSLPSPKK--------- 801
                |.|:....|::.:.|..:...          ...:|.||  .|.|.||:.::         
  Rat   125 ----RGGEVTRPSEVSRDLQILPPP----------LIPTPPSDEARLLQPLPAERRGQEELEVPV 175

  Fly   802 -------SKFSLSTLFRSDAGKAHEASKATDPFWGLQRDDEDIS---TYLDGESGG-----EAKM 851
                   ::.:|..||..|:.:...:|.|..|.     .:.:::   .|...||.|     .:::
  Rat   176 DPLPSSPAQEALDLLFCCDSTEEASSSPARGPL-----SEAELALFDPYSKEESTGPSPTHTSEL 235

  Fly   852 LAADLDSKDSIAEPMYALMGEIFDMGGVFKWLRKSLISFVQITYGRTINRQIRE------SVAYL 910
            .|.::.||....||        ::.||                      |:..|      :.|||
  Rat   236 AAMEVQSKRLDQEP--------WEPGG----------------------REEEEAEDGDPAPAYL 270

  Fly   911 FEESML---------HNYFSAILKSFWPG------GVLASAYPTRSEDMREMTTTAAK--ALLTD 958
            .:.:.|         ...::|.|:.:..|      ||.....|||.|.:::......|  ..|..
  Rat   271 GQATELITQALRNEKAGAYAAALQGYQEGVHILLQGVSGDPSPTRREGVKKKAAEYLKRAETLHA 335

  Fly   959 HIP 961
            |:|
  Rat   336 HLP 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snzNP_001284993.1 PXA 142..299 CDD:280373
RGS_SNX25 422..531 CDD:188675
PX_SNX25 645..788 CDD:132788 28/154 (18%)
Nexin_C 882..987 CDD:285792 19/103 (18%)
Snx15NP_001019923.1 PX_domain 10..127 CDD:295365 27/129 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 134..155 4/30 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 240..270 9/59 (15%)
MIT_SNX15 268..338 CDD:239140 16/69 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2101
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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