DRSC/TRiP Functional Genomics Resources

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Protein Alignment snz and SNX24

DIOPT Version :9

Sequence 1:NP_001284993.1 Gene:snz / 31704 FlyBaseID:FBgn0029976 Length:1117 Species:Drosophila melanogaster
Sequence 2:XP_011541651.1 Gene:SNX24 / 28966 HGNCID:21533 Length:246 Species:Homo sapiens


Alignment Length:122 Identity:30/122 - (24%)
Similarity:51/122 - (41%) Gaps:26/122 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   169 PKLINDVVREDLWNAIQKIHERALRMDAAKIIAVDMVNRVTVHLEKIRIAEARAAETNTPPVFST 233
            ||:: :..|:.|...:|.:   .|..:....:.:|.:|  ..||..:..||            |.
Human   101 PKVL-EQRRQGLETYLQAV---ILENEELPKLFLDFLN--VRHLPSLPKAE------------SC 147

  Fly   234 NSYLADEEKEMEFLRKLCEIMVILLLPRGYSLPPL----KVLLSEILSYKIFFPMIK 286
            .|:   :|.|.|...||....|:|.|...|.||..    .|::..:| :.||:|.::
Human   148 GSF---DETESEESSKLSHQPVLLFLRDPYVLPAASDFPNVVIEGVL-HGIFYPHLQ 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snzNP_001284993.1 PXA 142..299 CDD:280373 30/122 (25%)
RGS_SNX25 422..531 CDD:188675
PX_SNX25 645..788 CDD:132788
Nexin_C 882..987 CDD:285792
SNX24XP_011541651.1 PX_SNX22 1..144 CDD:132790 10/48 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2101
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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