DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment snz and Snx14

DIOPT Version :9

Sequence 1:NP_001284993.1 Gene:snz / 31704 FlyBaseID:FBgn0029976 Length:1117 Species:Drosophila melanogaster
Sequence 2:NP_001346887.2 Gene:Snx14 / 244962 MGIID:2155664 Length:946 Species:Mus musculus


Alignment Length:1137 Identity:226/1137 - (19%)
Similarity:397/1137 - (34%) Gaps:363/1137 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 RRLPLFPIEPEPSVTATQRLTLLATRLLRALQLNWRIIVSGITL-------TLLAVIWYYPTFFL 71
            |:.|||..    .:......:||..|.|..|.:.|..:...:|.       :||      |..|.
Mouse    26 RQYPLFCF----LLLCLSVASLLLNRYLHVLMIFWSFVAGVVTFYCSLGPDSLL------PNIFF 80

  Fly    72 FFAFVVYSLVL--VF-----AAVAGTVYIHYIFTTNEPTPPSRVPSRLLYNATKSNIFDLPKPIK 129
            ...:....|.|  :|     .||.|.|..           ....||.||.|.         :|. 
Mouse    81 TIKYKPKQLGLQELFPQGHSCAVCGKVKC-----------KRHRPSLLLENY---------QPW- 124

  Fly   130 NPSNLPLIFGKTVDLQLQQIIEYVLRDFMLPWLGYVVTKPKLINDV---VREDLWNAIQKIHERA 191
                |.|.....||..|.:::|.||.:|:.||...|......::::   :|......:::||   
Mouse   125 ----LDLKVSSKVDASLSEVLELVLENFVYPWYRDVTDDESFVDELRITLRFFASVLVRRIH--- 182

  Fly   192 LRMDAAKIIAVDMVNRVTVHLEKIRIAEARAAETNTPPVFSTNSY-------LADEEKEMEFLRK 249
             ::|...||...::.....|:|.|..|..:...|......:...|       |.....|:::|||
Mouse   183 -KVDIPSIITKKLLKAAMKHIEVIVKARQKVKNTEYLQQAALEEYGPELHVALRSRRDELQYLRK 246

  Fly   250 LCEIMVILLLPRGYSLPP-------LKVLLSEILSYKIFFPMIKMLTAPDYINQKVVQNIETRLA 307
            |.|    ||.|  |.|||       |.:|:.||||..:..|.:..|..||.:|..::..|:.   
Mouse   247 LTE----LLFP--YILPPKATDCRSLTLLIREILSGSVLLPSLDFLADPDTVNHLLIIFIDD--- 302

  Fly   308 AAAMSKRSYEYAASFEDFLKIINNSGNLEELSLIRKSIVNDLMHATTMQNLQRAKGLDPDHEDHS 372
              :..:::.|.|:....||:                                  |..:|.::..|
Mouse   303 --SPPEKATEPASPLVPFLQ----------------------------------KFAEPRNKKPS 331

  Fly   373 LSKSELTAAVRLKRYVRQLTMAKGECEKNLAKFGWNGNYSSDIDLTLVEILNTAVGRRYFTLFLE 437
            :.|.||       :.:|:                     ..|:   |...:|          ||:
Mouse   332 VLKLEL-------KQIRE---------------------QQDL---LFRFMN----------FLK 355

  Fly   438 PLKASALIGFYLAVEEIKHAHKSASHQLGTEIFYTYIRVPKSEIQIDK----HE--RKLIETFLL 496
            ...|..::.|.|.|||...                  |:.:.|:..|:    ||  :|:.:|:.|
Mouse   356 QEGAVHVLQFCLTVEEFND------------------RILRPELSNDEMLSLHEELQKIYKTYCL 402

  Fly   497 GDA------EPDIFYDIQR-----------------------NVLRTLEEKYYPPFVLSDQY-RQ 531
            .::      :|.|..:|||                       :||..||..:.|.|..||:| ||
Mouse   403 DESIDKIRFDPFIVEEIQRIAEGPYIDVVKLQTMRCLFEAYEHVLSLLENVFTPMFCHSDEYFRQ 467

  Fly   532 LKEALDSNEIADPTLLMCHTIGDVQEPLAD----EQPGAADGLNGGAGGAIDVAAHTSYARRKLE 592
            |....:|     ||.......|.:.  |.|    ::.|.:.|::                     
Mouse   468 LLRGAES-----PTRNSKFNRGSLS--LDDFRSTQKRGESFGIS--------------------- 504

  Fly   593 QIQERIDKKNQALDALKYSVKPESKVLT---ILEKEMEWLK------SEKRQTEAHLRRTDAWTE 648
                ||..|   :..:..|...|..||.   :.|.|.::::      .:....||  ..|.....
Mouse   505 ----RIGSK---IKGVFKSTTMEGAVLPNYGVAEGEDDFIEEGIVVMEDDSPVEA--VSTPNTPR 560

  Fly   649 HLGKWKATIQSVEV-----SDEKESLQFMILVHVDEDINAPVQPTSSKNGDSGHANLRKRPSGIS 708
            :|..||.:|..|:.     |:.||..:.:.:..:|.:                 .|.|:......
Mouse   561 NLAAWKISIPYVDFFEDPSSERKEKKERIPVFCIDVE-----------------RNDRRAVGHEP 608

  Fly   709 SGWVVMRSLNQVHELQRKLRHVSSNLKAIDLPT-------NFKFFFLKTDRHGQEKAKSQIQKFL 766
            ..|.|.|...:.:.|:.||...........||:       |::  |||:.|       .:.|::|
Mouse   609 EHWSVYRRYLEFYVLESKLTEFHGTFPDAQLPSKRIIGPKNYE--FLKSKR-------EEFQEYL 664

  Fly   767 NFILEDDHLNGSEAIYTFLSPS---SDHLKQSLPSPKKSKFSLSTLFRSDAGK-AHEASKATDPF 827
            ..:::...|:.|:.:..||||:   :..|.:.||.     .:|..:.:|..|| ..|..:..:||
Mouse   665 QKLVQHPELSNSQLLADFLSPNGGETQFLDKILPD-----VNLGKIIKSVPGKLMKEKGQHLEPF 724

  Fly   828 WGLQRDDEDISTYLDGESGGEAKMLAADLDSKDSIAEPMYALMGEIF------------------ 874
                     |.::::.....:.|....:|......:|....|..::|                  
Mouse   725 ---------IMSFINSCESPKPKPSRPELTILSPTSENNKKLFNDLFKNNANRAENTERKQNQNY 780

  Fly   875 -----DMGGVF--------------KWLRKSLISFVQITYGRTI----NRQIRESVAYLFEESML 916
                 .:.||:              .||...|:. .:|.:..|:    :..::..:..||:|..|
Mouse   781 FMEVMTVDGVYDYLMYVGRVVFQVPDWLHHLLMG-TRILFKNTLEMYTDYYLQCKLEQLFQEHRL 844

  Fly   917 HNYFSAILKSFWPGGVLASAYPTRSEDMREMTTTAAKALLTDHIPEVLCNLVGAQAAKRGVLKVF 981
            .:..:.:..:.:    ..:..|...:|.::......:.:: ::||:::...:|.:.....:..:|
Mouse   845 VSLITLLRDAIF----CENTEPRSLQDKQKGAKQTFEEMM-NYIPDLIVKCIGEETKYESIRLLF 904

  Fly   982 DALQNPAYNKQLFYELLEILMIEFFPEIRQLR 1013
            |.||.|..||||.|.||:|::.|.|||:.:::
Mouse   905 DGLQQPVLNKQLTYVLLDIVIQELFPELNKVQ 936

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snzNP_001284993.1 PXA 142..299 CDD:280373 47/173 (27%)
RGS_SNX25 422..531 CDD:188675 31/144 (22%)
PX_SNX25 645..788 CDD:132788 31/154 (20%)
Nexin_C 882..987 CDD:285792 18/108 (17%)
Snx14NP_001346887.2 PXA 130..299 CDD:308031 47/178 (26%)
RGS_SNX14 340..466 CDD:188677 34/177 (19%)
PX_SNX14 564..686 CDD:132787 30/147 (20%)
Nexin_C 807..911 CDD:337134 18/109 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2101
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1370
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.840

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