DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment snz and SNX13

DIOPT Version :9

Sequence 1:NP_001284993.1 Gene:snz / 31704 FlyBaseID:FBgn0029976 Length:1117 Species:Drosophila melanogaster
Sequence 2:NP_001337791.1 Gene:SNX13 / 23161 HGNCID:21335 Length:968 Species:Homo sapiens


Alignment Length:1078 Identity:246/1078 - (22%)
Similarity:406/1078 - (37%) Gaps:279/1078 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 GITLTLLA---VIWYYPTFFLFFAFVVYSLV--LVFAAVAGTVYI----HYIFTTNEPTPPS--- 106
            ||.|.|:.   .:.:|.||:: ..||...||  |:|.......|:    |.......|..|.   
Human    16 GIVLFLITFGPFVIFYLTFYI-LCFVGGGLVVTLLFGKTNSEKYLEQCEHSFLPPTSPGVPKCLE 79

  Fly   107 ---------RVPSRLLYNATKSNIFDLPKPIKNPSNLPLIFGKTVDLQLQQIIEYVLRDFMLPWL 162
                     ::..||    |.:||.|.|                    |||:|::.|||::..|.
Human    80 EMKREARTIKIDRRL----TGANIIDEP--------------------LQQVIQFSLRDYVQYWY 120

  Fly   163 GYVVTKPKLINDVVREDLWNAIQKIHERALRMDAAKIIAVDMVNRVTVHLEKIRIAEARAAETNT 227
             |.::..:.....:|:.|.||:.:...|:..:|........:|:....||...|.|:.:..|.: 
Human   121 -YTLSDDESFLLEIRQTLQNALIQFATRSKEIDWQPYFTTRIVDDFGTHLRVFRKAQQKITEKD- 183

  Fly   228 PPVFSTNSYLADE----EKEME-----------------FLRKLCEIMVILLLPRG-YSLPPLKV 270
            ..|..|...|.|.    |.|||                 |||.|||:::.||||.| :....::.
Human   184 DQVKGTAEDLVDTFFEVEVEMEKEVCRDLVCTSPKDEEGFLRDLCEVLLYLLLPPGDFQNKIMRY 248

  Fly   271 LLSEILSYKIFFPMIKMLTAPDYINQKVVQNIETRLAAAAMSKRSYEYAASFEDFLKIINNSGNL 335
            .:.|||:..|..|:|..|:.||||||.|:..|.             :...::|.|:.||..|.|:
Human   249 FVREILARGILLPLINQLSDPDYINQYVIWMIR-------------DSNCNYEAFMNIIKLSDNI 300

  Fly   336 EELSLIRKSIVNDLMHATTMQNLQRAKGLDPDHEDHSLSKSELTAAVRLKRY----VRQLTMAKG 396
            .||..:|..         ..:.||..:.||...:|.:..|:::.:.:.:|:.    :::|...| 
Human   301 GELEAVRDK---------AAEELQYLRSLDTAGDDINTIKNQINSLLFVKKVCDSRIQRLQSGK- 355

  Fly   397 ECEKNLAKFGWNGNYSSDIDLTLVEILNTAVGRRYFTLFLEPLKASALIGFYLAVEEIK------ 455
              |.|..|..  .|:.....:.|..||...|..::|..:::.....|.:.|::.||..:      
Human   356 --EINTVKLA--ANFGKLCTVPLDSILVDNVALQFFMDYMQQTGGQAHLFFWMTVEGYRVTAQQQ 416

  Fly   456 -----HAHKSASHQ----------LGTEIFYTYIRVPKS-EIQIDKH-ERKLIETFLLGDAEPDI 503
                 ...:...||          ....|:..|:....| .:.:|.: ..||.:|....|..|:|
Human   417 LEVLLSRQRDGKHQTNQTKGLLRAAAVGIYEQYLSEKASPRVTVDDYLVAKLADTLNHEDPTPEI 481

  Fly   504 FYDIQRNV--LRTLEEKYYPPFVLSDQYRQLKEALDSNEIADPTLLMCHTIGDVQEPLADEQPGA 566
            |.||||.|  |...:|::||.|..:..|.::...||.  :.||:             ......|.
Human   482 FDDIQRKVYELMLRDERFYPSFRQNALYVRMLAELDM--LKDPS-------------FRGSDDGD 531

  Fly   567 ADGLNGGAGGAIDVAAHTSYARRKLEQIQERIDKKNQALDALKYSVKPESKVLTILEKEMEWLKS 631
            .:..||...|:|                       |.:||.|. :|..:..|             
Human   532 GESFNGSPTGSI-----------------------NLSLDDLS-NVSSDDSV------------- 559

  Fly   632 EKRQTEAHLRRTDAWTEHLGKWKATIQSVEVSDEKESLQFMILVHVDEDINAPVQPTSSKNGDSG 696
               |..|::..|                               |:.|.|..|    .:....|.|
Human   560 ---QLHAYISDT-------------------------------VYADYDPYA----VAGVCNDHG 586

  Fly   697 HA------NLRKRPSGISSGWVVMRSLNQVHELQRKLRHVSSNLKAI-DLPTNFKFFFLKTDRHG 754
            ..      .:.:|.......|...|..:..|:...::.....:|.:| .||.  |..|...||..
Human   587 KTYALYAITVHRRNLNSEEMWKTYRRYSDFHDFHMRITEQFESLSSILKLPG--KKTFNNMDRDF 649

  Fly   755 QEKAKSQIQKFLNFILEDDHLNGSEA----IY--------------------TFLSPSSDHLKQS 795
            .||.|..:..:|..:|..:.:..|.|    :|                    ||::|..:.::..
Human   650 LEKRKKDLNAYLQLLLAPEMMKASPALAHYVYDFLENKAYSKGKGDFARKMDTFVNPLRNSMRNV 714

  Fly   796 LPSPKKSKFSLS---TLFRSDAGKAHEASKATDPFWGLQRDDEDISTYL--------DGESGGEA 849
            ..:.|....||:   |....:.||..|            |..:||....        ..:|..|.
Human   715 SNAVKSLPDSLAEGMTKMSDNMGKMSE------------RLGQDIKQSFFKVPPLIPKTDSDPEH 767

  Fly   850 KMLAADLDSK--DSI-AEPMYALMGEIFDMGGVFKWLRKSLISFVQ----ITYGRTINRQIRESV 907
            :.::|.||..  |:| ...|..||.|:||:....:|||:::.:.:|    .|||.||||:|.:.|
Human   768 RRVSAQLDDNVDDNIPLRVMLLLMDEVFDLKERNQWLRRNIKNLLQQLIRATYGDTINRKIVDHV 832

  Fly   908 AYLFEESMLHNYFSAILKSFWPGGVLASAYPTRSEDMREMTTTAAKALLTDHIPEVLCNLVGAQA 972
            .::.....:.:.......:|||.|:||.|.|.|.:.:|..|..|.|..|...:|:.|.:::||:.
Human   833 DWMTSPEQVADSVKRFRDAFWPNGILAEAVPCRDKSIRMRTRVAGKTKLLAIMPDELKHIIGAET 897

  Fly   973 AKRGVLKVFDALQNPAYNKQLFYELLEILMIEFFPEIR 1010
            .::|:|:||:..|:...|:::.|..||..:...||:.:
Human   898 TRKGILRVFEMFQHNQLNRRMVYVFLEGFLETLFPQYK 935

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snzNP_001284993.1 PXA 142..299 CDD:280373 53/178 (30%)
RGS_SNX25 422..531 CDD:188675 32/133 (24%)
PX_SNX25 645..788 CDD:132788 28/173 (16%)
Nexin_C 882..987 CDD:285792 36/108 (33%)
SNX13NP_001337791.1 PXA 97..284 CDD:214611 59/221 (27%)
RGS_SNX13 377..511 CDD:188674 32/133 (24%)
PX_SNX13 557..687 CDD:132783 30/182 (16%)
Nexin_C 803..911 CDD:312222 35/107 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2101
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S5758
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D104136at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1370
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
54.800

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