DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment snz and Pxk

DIOPT Version :9

Sequence 1:NP_001284993.1 Gene:snz / 31704 FlyBaseID:FBgn0029976 Length:1117 Species:Drosophila melanogaster
Sequence 2:NP_663433.2 Gene:Pxk / 218699 MGIID:1289230 Length:582 Species:Mus musculus


Alignment Length:660 Identity:120/660 - (18%)
Similarity:214/660 - (32%) Gaps:248/660 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 LPLIFGKTVDLQLQQIIEYVLRDFMLPWLGYVVTKPKLINDVVREDLWNAIQKIHERALRMDAAK 198
            :||.........||...||::|               :...:..|:.|..:::..:..|..::.:
Mouse    18 VPLTAAVEASQSLQSHTEYIIR---------------VQRGISAENSWQIVRRYSDFDLLNNSLQ 67

  Fly   199 IIAVDM---VNRVTVHLEKIRIAEARAAETNTPPVFSTNSYLADEEKEMEFLRKLCEIMVILLLP 260
            |..:.:   ..::..::::..|||.:....|...|...|..|::           ||::...|.|
Mouse    68 ITGLSLPLPPKKLIGNMDREFIAERQRGLQNYLNVIMANHVLSN-----------CELLKKFLDP 121

  Fly   261 RGYSLPPLKVLLSEILSY----------------------KIFFPMIK-------MLT----APD 292
            ..||....::.|.::..:                      |.|...||       :|:    .||
Mouse   122 NNYSANYTEIALQQVSMFFRSEPKWEVVEPLKDIGWRIRKKYFLMKIKNQPKERLVLSWADLGPD 186

  Fly   293 -YINQKVVQNIETRLAAAAMSKRSYEYAASFED-------FLKIINNSGNLEELSLIRKSIVNDL 349
             |::.|..|.:...|.:..   ..|.|..:|..       .::..|..|.|::|           
Mouse   187 KYLSDKDFQCLIKLLPSCV---HPYIYRVTFATASESSALLIRAFNEKGTLKDL----------- 237

  Fly   350 MHATTMQNLQRAKGLDPDHEDH-SLSKSELTAAVRLKRYVRQLTMA------KGECEKNLAKFGW 407
                    :.:||..||..:.: :..|::.....::|.|.||:..|      ||        |.:
Mouse   238 --------IYKAKPKDPFLKKYCNPKKTQGLELQQIKTYGRQILEALKFLHDKG--------FPY 286

  Fly   408 NGNYSSDIDL-----TLVEILNTAVG-----RRYFTLFLEPLKASALIGFYLAVEEIKHAHKSAS 462
            ...:::::.|     .|:::.|:.:|     |.|||.|                .:|........
Mouse   287 GHLHAANVMLDGNTCRLLDLENSLLGLPSFYRSYFTQF----------------RKINTLESVDV 335

  Fly   463 HQLGTEIF-YTYIRVPKSEIQIDKHERKLIETFLLGDAEPDIFYDIQRNVLRTLEEKYYPPFVLS 526
            |..|..:: .||.|.|.| :.:|.                                  :||....
Mouse   336 HCFGHLLYEMTYGRPPDS-VPVDS----------------------------------FPPASSL 365

  Fly   527 DQYRQLKEALDSNEIAD--PTLLMCHTIGDVQEPLADEQPGAADGLNGGAGGAIDVAAHTSYARR 589
            .....|:..|......:  ||:...     :|.||..                 ||...||    
Mouse   366 AVVAVLESTLSCEACKNGMPTVSRL-----LQMPLFS-----------------DVLLTTS---- 404

  Fly   590 KLEQIQERIDKKNQALDALKYSVKPESKVLTILEKEMEWLKSEKRQTEAHLRRTDAWTEH----- 649
              |:.|.:|..|.:  :||:.:.:...|.||          .|::|...|.|.|.|.:.|     
Mouse   405 --EKPQFKIPTKLK--EALRIAKECIEKRLT----------EEQKQIHQHRRLTRAQSHHGSEEE 455

  Fly   650 ------LGKWKATIQSVEVSDEKESLQFMILVHVDEDINAPVQPTSSKN-GDSGHANLRKRPS-- 705
                  |.:.|:...:||.|:|:                 ||:.::|.| ..||.::....||  
Mouse   456 RKRRKILARKKSKRSAVENSEEQ-----------------PVKHSNSNNSAGSGASSPLTSPSSP 503

  Fly   706 ------GISS 709
                  |:||
Mouse   504 TPPSTAGLSS 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snzNP_001284993.1 PXA 142..299 CDD:280373 32/193 (17%)
RGS_SNX25 422..531 CDD:188675 18/114 (16%)
PX_SNX25 645..788 CDD:132788 19/85 (22%)
Nexin_C 882..987 CDD:285792
PxkNP_663433.2 PX_MONaKA 13..132 CDD:132781 24/139 (17%)
PKc 198..345 CDD:270622 33/192 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 433..550 24/98 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2101
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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