Sequence 1: | NP_001284993.1 | Gene: | snz / 31704 | FlyBaseID: | FBgn0029976 | Length: | 1117 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_502016.2 | Gene: | nish-1 / 177981 | WormBaseID: | WBGene00008750 | Length: | 497 | Species: | Caenorhabditis elegans |
Alignment Length: | 428 | Identity: | 87/428 - (20%) |
---|---|---|---|
Similarity: | 144/428 - (33%) | Gaps: | 139/428 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 129 KNPSNLPLIFGKTVDLQLQQIIEYVLRDFML-------PWLGYVVTKPK----------LINDVV 176
Fly 177 R------------EDLWNAIQKIHE-RALRM---------------------------------- 194
Fly 195 -DAAKIIAV----DMVNRVTVH--LEKIR--IAEARAAETNTPPVFSTNSYLADEEKEMEFLRKL 250
Fly 251 C--EIMVILLLPRGYSLPPLKVL------LSEILSYKIFFPMIKMLTAPDYINQKVVQNIETRLA 307
Fly 308 AAAMSKRSYEYAASFEDFLKIINNSGNLEELSLIRKSIVNDLMHA--TTMQNLQRAKGLD--PDH 368
Fly 369 EDHSLSKSELTAAVRLKRYVRQLTMAKGECEKNLAKFGWNGNYSSDIDLTLVEILNTAVGRRYFT 433
Fly 434 LFLEPLKASALIGFYLAVEEIKHAHKSASHQLGTEIFY 471 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
snz | NP_001284993.1 | PXA | 142..299 | CDD:280373 | 47/237 (20%) |
RGS_SNX25 | 422..531 | CDD:188675 | 10/50 (20%) | ||
PX_SNX25 | 645..788 | CDD:132788 | |||
Nexin_C | 882..987 | CDD:285792 | |||
nish-1 | NP_502016.2 | PX_domain | 18..137 | CDD:383026 | 10/27 (37%) |
LRR | <289..423 | CDD:227223 | 35/158 (22%) | ||
leucine-rich repeat | 291..313 | CDD:275380 | 7/29 (24%) | ||
leucine-rich repeat | 314..336 | CDD:275380 | 6/24 (25%) | ||
leucine-rich repeat | 337..359 | CDD:275380 | 6/35 (17%) | ||
leucine-rich repeat | 360..381 | CDD:275380 | 6/20 (30%) | ||
leucine-rich repeat | 382..406 | CDD:275380 | 5/23 (22%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2101 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |