DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment snz and Kif16b

DIOPT Version :9

Sequence 1:NP_001284993.1 Gene:snz / 31704 FlyBaseID:FBgn0029976 Length:1117 Species:Drosophila melanogaster
Sequence 2:XP_036014693.1 Gene:Kif16b / 16558 MGIID:1098240 Length:1908 Species:Mus musculus


Alignment Length:1181 Identity:213/1181 - (18%)
Similarity:369/1181 - (31%) Gaps:482/1181 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 LLYNATKSNIFDLPKPIKNPSNLPLIFGKTVDLQLQQIIEYVLRDFMLPWLGYVVTKPKLINDVV 176
            :|||   ..:|    |||.|..|.|.|.:....:|:::                .:|.|||.::.
Mouse   624 MLYN---PGLF----PIKGPICLRLEFERQQREELEKL----------------ESKRKLIEEME 665

  Fly   177 R---------EDLWNAIQ------KIHERALRMDAAKIIAVDMVNRVTVHL---------EKIRI 217
            .         |.:...::      :|.:|.:|...      :.:.|.:.|:         ||.|.
Mouse   666 EKQKSDKAELERMQQEVETRRKETEIVQRQIRKQE------ESLKRRSFHIENKLKDLLAEKERF 724

  Fly   218 AEARAAETNTPPVFSTNSYLADEEKEM----EFLRKLCEIMVILLLPRGYSLPPLKVLLSEILSY 278
            .|.|..|..     ........||:.:    |.||||.|                  |.|...:.
Mouse   725 EEERLREQQ-----GLEQQRRQEEESLFRIREELRKLQE------------------LNSHEQAE 766

  Fly   279 KIFFPMIKMLTAPDYINQKV-VQNIETRLAAAAM---SKRSYEYAASFEDFLKIINNSGNL---- 335
            |     :::....|.::|:. .|:.:.||....:   .|...:..|..|:.|:...::..|    
Mouse   767 K-----VQIFQELDRLHQEQNAQSAKLRLEKRRLEEEEKEQVQRVAHLEEQLRKRQDTAPLLCPG 826

  Fly   336 ---------EELSLIRKSIVNDLMHATTMQNLQRAKGLDPDHEDHSLSKSELTAA----VRLKRY 387
                     .||..||::    |:.|..|    ||.|      ||: .:.||..|    :..|| 
Mouse   827 EAQRAQEEKRELESIREA----LLQAKEM----RAGG------DHT-CRDELERAQQYFLEFKR- 875

  Fly   388 VRQLTMAKGECEKNLAKFGWNGNYSSDIDLTLVEILNTAVGRRYFTLFLEPLKASALIG---FYL 449
             ||| :.....||:|.:         ..||...|:....|.       ||.:|..|  |   .:|
Mouse   876 -RQL-VKLASLEKDLVQ---------QKDLLSKEVQEEKVA-------LEHVKCDA--GGDPSFL 920

  Fly   450 AVEEIKHAHKSASHQLGTEIFYTYIRVPKSEIQIDKHERKLIETFLLGDAEPDIFYDIQRNVLRT 514
            |.::        .:.||.......|:..::.:|..:|:                ..|:.:|.|  
Mouse   921 ATDD--------GNILGGPPDLDKIKTAETRLQSREHQ----------------LQDLLQNHL-- 959

  Fly   515 LEEKYYPPFVLSDQYRQLKEALDSNEIA-DPTLLMCHT---IGDVQEPLADEQPGAA--DGLNGG 573
                   |.:|.::.|.| :||||..:. |.||  |..   :|:.:|.:|..|..|:  ..|...
Mouse   960 -------PALLEEKQRVL-DALDSGVLGLDTTL--CQVEKEVGEKEEQIAQYQANASQLQQLRAT 1014

  Fly   574 AGGAIDVAAHTSYARRKLEQIQERIDKKNQALDALKYSV-KPESKVLTI-----LEKEMEWLKSE 632
            .....:||......|||.::|.|..:|  |..:||:.:| |.|.:...:     |:.|::    |
Mouse  1015 FEFTANVARQEEKVRRKEKEILESQEK--QQREALEQAVAKLEQRRSALQRCSTLDLEIQ----E 1073

  Fly   633 KRQTEAHLRRTDAWTEHLGKWKATIQS-------------VEVSDEKES---------------- 668
            :||....| .|..|:    .|:|::::             .|:...|:.                
Mouse  1074 QRQKLGSL-HTSEWS----GWQASLETDGEALEMDPARLEHEIHQLKQKICEVDGVQRPHHGILE 1133

  Fly   669 --------------------LQFMILVHVDEDINAPVQPTSSKNGDSGHANLRKRPSGISSGWVV 713
                                :...|..:::|::...:.......||:.|.     |:.      |
Mouse  1134 GQAVLSSLPPSGGNSHLAPLMDARISAYIEEEVQRRLHDLHRAIGDANHT-----PAD------V 1187

  Fly   714 MRSLNQVHE--LQRKLRHVSS------------NLKAIDLPTNFK-------------------- 744
            |:|..::|.  .||||::.:.            :..|.|.|:..:                    
Mouse  1188 MKSNEELHNGTTQRKLKYETGQPWSAPCVIPLLSKDAADSPSVLREESEMCPSSQRSHLMSQNTS 1252

  Fly   745 ----FFFLKTDR----HGQEKAKSQIQKFL------------NFILEDDHLN------------- 776
                |.....:|    .|.|..|:...||.            ..:||...||             
Mouse  1253 LSTAFSMASQERMVLHSGTELLKNIGDKFCYPENSGHLEPNRAHLLEITSLNERSSRDAQNSQGE 1317

  Fly   777 ----------------GSEAIYTFLSPSSDHLKQSLPSPKKS---------KFSLS-TLFRSDAG 815
                            |.|:.:|.|    .|:.|.:|:.:.|         :|.|| :|.:.:..
Mouse  1318 SENGNGFMAPEEKQSWGIESSWTLL----QHVSQQVPANRGSQQAMQSRVLRFVLSESLSQREQP 1378

  Fly   816 KAHEASKATDPFWGLQRDDEDISTYLDGESGGEAKMLAADLDSKD-SIAEPMYALMGEIFDMGGV 879
            ......:.:.|....::.:|..|                  |:|: ||..|:.            
Mouse  1379 TGSSPQRVSAPTLSCEQQNEKYS------------------DAKNTSILAPLV------------ 1413

  Fly   880 FKWLRKSLISFVQITYGRTINRQIRESVAYLFEESMLHNYFSAILKSFWPGGVLASAYPTRSEDM 944
                              .|..:.::.:.:.:.:      ||.:.|.  ..|.|..|........
Mouse  1414 ------------------NIRTEAKKQLGFFYHK------FSDLYKD--TSGHLIQAGTKVMSQA 1452

  Fly   945 REMTTTAAKALLTDHIPEVLCNLVGAQAAKRGVLKVFDALQNPAYNKQLFYELLEILMIEFFPEI 1009
            :.:.:......||.|:...:          ||                       :.::|..|:.
Mouse  1453 KHVGSMCDPGELTSHVTTFI----------RG-----------------------LPLLEHLPQH 1484

  Fly  1010 RQLRVSNSNGTKLNTATAGAAAASAAAALVAATASASLP-----SLNHSGGG---HSASTGGHQN 1066
            ..||                       :|:..:....||     |.|..|||   .:.||..|:|
Mouse  1485 LPLR-----------------------SLMVPSGPPPLPETQIGSFNSEGGGSPRSAKSTAPHRN 1526

  Fly  1067 HQGSSSASGSS 1077
            ...:|:.:.:|
Mouse  1527 LAFTSTDAPNS 1537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snzNP_001284993.1 PXA 142..299 CDD:280373 30/185 (16%)
RGS_SNX25 422..531 CDD:188675 18/111 (16%)
PX_SNX25 645..788 CDD:132788 37/274 (14%)
Nexin_C 882..987 CDD:285792 12/104 (12%)
Kif16bXP_036014693.1 KISc_KIF1A_KIF1B 51..399 CDD:276816
Kinesin_assoc 398..510 CDD:406567
FHA 512..577 CDD:395400
SbcC <644..1081 CDD:223496 117/564 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2101
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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