DRSC/TRiP Functional Genomics Resources

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Protein Alignment snz and SNX20

DIOPT Version :10

Sequence 1:NP_572421.1 Gene:snz / 31704 FlyBaseID:FBgn0029976 Length:1117 Species:Drosophila melanogaster
Sequence 2:NP_878274.1 Gene:SNX20 / 124460 HGNCID:30390 Length:316 Species:Homo sapiens


Alignment Length:333 Identity:69/333 - (20%)
Similarity:118/333 - (35%) Gaps:98/333 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   354 TMQNLQRAKGLDPD--------HED-HS-LSKSELTAAVRLKRY-------------VRQLTMAK 395
            |.:..|.|....||        |.| || ||.:.......|::|             :.::..|:
Human    20 TARTQQEAPATGPDLPHPGPDGHLDTHSGLSSNSSMTTRELQQYWQNQKCRWKHVKLLFEIASAR 84

  Fly   396 GECEKNLAKFG-------WNGNYSSDIDLTLVEILNTAVGRRYFTLFLEPLKASALIGFYLAVEE 453
            .| |:.::||.       ..|::.:          |.||..|.::.|.: |:.:.|..|...:|:
Human    85 IE-ERKVSKFVVYQIIVIQTGSFDN----------NKAVLERRYSDFAK-LQKALLKTFREEIED 137

  Fly   454 IKHAHKSASHQLGTEIFYTYIRVPKS------EIQIDKHERKLIETFLLGDAEPDIFYDIQRNVL 512
            ::...|..:.....|:.....|..:.      .|:..:..|:.:: ||   ..|::     |...
Human   138 VEFPRKHLTGNFAEEMICERRRALQEYLGLLYAIRCVRRSREFLD-FL---TRPEL-----REAF 193

  Fly   513 RTLEEKYYP-PFVLSDQYRQLKEALDSN--EIADPTL---LMCHTIGDVQEPLADEQPGAADGLN 571
            ..|....|| ...|..:...|:|.|.::  ..|.|.|   |:||.  |:..|        |:...
Human   194 GCLRAGQYPRALELLLRVLPLQEKLTAHCPAAAVPALCAVLLCHR--DLDRP--------AEAFA 248

  Fly   572 GGAGGAIDVAAHTSYARRKLEQIQERIDKKNQA--LDALKYSVKPESKVLTILEKEMEWLKSEKR 634
            .|              .|.|:::|.|...:..|  |||:........|....|::.:|       
Human   249 AG--------------ERALQRLQAREGHRYYAPLLDAMVRLAYALGKDFVTLQERLE------- 292

  Fly   635 QTEAHLRR 642
              |:.|||
Human   293 --ESQLRR 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snzNP_572421.1 PXA 142..300 CDD:460484
RGS_SNX25 422..531 CDD:188675 22/115 (19%)
PX_SNX25 645..788 CDD:132788
Nexin_C 882..987 CDD:462541
SNX20NP_878274.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 23..54 10/30 (33%)
PX_SNX20 76..189 CDD:132833 23/128 (18%)
Blue background indicates that the domain is not in the aligned region.

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