DRSC/TRiP Functional Genomics Resources

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Protein Alignment spidey and Hsdl1

DIOPT Version :9

Sequence 1:NP_572420.1 Gene:spidey / 31703 FlyBaseID:FBgn0029975 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_001020067.1 Gene:Hsdl1 / 361418 RGDID:1308433 Length:330 Species:Rattus norvegicus


Alignment Length:314 Identity:124/314 - (39%)
Similarity:188/314 - (59%) Gaps:26/314 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 AIGIVG-FQVFRKVLPWI--YANVVG----PKVFGSSVDLSKM-GEWAVVTGSTDGIGKAYAKEL 72
            |:.:|| :...||.:|.|  :.::|.    |:: ||..||.|. |.|||::|:|||||||||:||
  Rat    24 ALALVGAWYTARKSIPVICDFYSLVRLHFIPRL-GSRPDLIKQYGRWAVISGATDGIGKAYAEEL 87

  Fly    73 ARRGLKLVLISRSLEKLNVVAKEIGDKYGVEVRVIDVDFTGGDEIYDKIREKTTGLNVGVLVNNV 137
            |..||.::|||:..|||..|||.|.|.|.||..|:..||:.|.|||..|||.....::|:|||:|
  Rat    88 ASHGLNIILISQEEEKLQAVAKHIADTYRVETLVLVADFSRGREIYAPIREALRDRDIGILVNDV 152

  Fly   138 GISYGHPEYFLDCYKADPPFLRNIVAANIHSVTHMTALFLPGMISQRRGVIINVSSTAGVIPNPL 202
            |..|.:|:||   .:.....:.:||..||.:.:.|..:.||||:.:::|.|:.|||.:...|.|.
  Rat   153 GAFYPYPQYF---SQVPEDTIWDIVNVNIAAASLMVHIVLPGMVERKKGAIVTVSSGSCCKPTPQ 214

  Fly   203 LSVYSSTKAFVNKFSDDLQTEYKEHGILIQSVQPGFVATNM----SKIRKASVFAPSPETYVRSA 263
            |:.:|::||:::.||..||.||...||.:||:.|.:|.:::    |.:|:....||||..|.:.|
  Rat   215 LAAFSASKAYLDHFSRALQYEYASKGIFVQSLIPFYVTSSVTAPGSFLRRCPWLAPSPRVYAQHA 279

  Fly   264 LSTLGIATQTAGYLPHALLQLVIHFTEA---VFGEQFARNIVMKNILGTRKRAL 314
            :|||||:.:|.||..|::..|...:...   |:|    .|::.:::   ||.||
  Rat   280 VSTLGISKRTTGYWSHSIQFLFAQYMPEWLWVWG----ANLLNRSL---RKEAL 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spideyNP_572420.1 PLN02780 8..321 CDD:166421 124/314 (39%)
17beta-HSD1_like_SDR_c 52..288 CDD:187614 103/239 (43%)
Hsdl1NP_001020067.1 Required for mitochondria translocation. /evidence=ECO:0000250 2..82 24/58 (41%)
17beta-HSD1_like_SDR_c 67..309 CDD:187614 103/244 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0300
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53762
OrthoDB 1 1.010 - - D584062at33208
OrthoFinder 1 1.000 - - FOG0000465
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100431
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.730

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