DRSC/TRiP Functional Genomics Resources

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Protein Alignment spidey and firl

DIOPT Version :10

Sequence 1:NP_572420.1 Gene:spidey / 31703 FlyBaseID:FBgn0029975 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_001033900.2 Gene:firl / 34627 FlyBaseID:FBgn0032405 Length:318 Species:Drosophila melanogaster


Alignment Length:220 Identity:60/220 - (27%)
Similarity:100/220 - (45%) Gaps:36/220 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 FQVFRKVLPWIYANVVGPKVFGSSVDLSKMGEWAVVTGSTDGIGKAYAKELARRGLKLVLIS--- 83
            |:::.::|..::.::|...:.....|:|  ||..::||:..|||:..|...|..|..:|.:.   
  Fly    27 FELYVRILLELFVSLVQIVLPKKQKDVS--GEIVLITGTGHGIGRELALHYASLGSTVVCVDIDG 89

  Fly    84 ----RSLEKLNVVAK--EIGDKYGVEVRVIDVDFTGGDEI---YDKIREKTTGLNVG---VLVNN 136
                :::||    ||  .:|:.|.     ...|.:..||:   .|:|:.     :||   |||||
  Fly    90 KNNLQTVEK----AKRLNLGEVYS-----YSCDVSKRDEVTALADRIKS-----DVGCISVLVNN 140

  Fly   137 VGISYGHPEYFLDCYKADPPFLRNIVAANIHSVTHMTALFLPGMISQRRGVIINVSSTAGVIPNP 201
            |||...||     ..:.....::.:...|:.|.......|||.|..:.||.||.:||.||::...
  Fly   141 VGIMPTHP-----ILQQSAEEIQRVFDVNVFSQFWTIQAFLPHMQEKCRGHIICMSSIAGLVGIS 200

  Fly   202 LLSVYSSTKAFVNKFSDDLQTEYKE 226
            .|..|.:||..|....:.|..|.::
  Fly   201 NLVPYCATKFAVRGLMEALHAELRQ 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spideyNP_572420.1 17beta-HSD1_like_SDR_c 52..288 CDD:187614 55/190 (29%)
firlNP_001033900.2 17beta-HSDXI-like_SDR_c 57..299 CDD:187598 53/188 (28%)

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