DRSC/TRiP Functional Genomics Resources

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Protein Alignment spidey and Wwox

DIOPT Version :10

Sequence 1:NP_572420.1 Gene:spidey / 31703 FlyBaseID:FBgn0029975 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_609171.1 Gene:Wwox / 34090 FlyBaseID:FBgn0031972 Length:409 Species:Drosophila melanogaster


Alignment Length:221 Identity:46/221 - (20%)
Similarity:88/221 - (39%) Gaps:40/221 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 GEWAVVTGSTDGIGKAYAKELARRGLKLVLISRSLEKLNVVAKEIGDKYGV---EVRVIDVDFTG 113
            |..|::||:..|||...|:.||..|.:::...|:........:.|..:...   ..|...:|.:.
  Fly   121 GRTALITGANCGIGYETARSLAHHGCEIIFACRNRSSAEAAIERIAQERPAARSRCRFAALDLSS 185

  Fly   114 GDEIYDKIRE-KTTGLNVGVLVNNVGISYGHPEYFLDCYKADPPFLRNIVA-ANIHSVTHMTALF 176
            ...:...:.| |.:..::..|:.|.|:      :.|       |:.|.:.. .....|:|::..:
  Fly   186 LRSVQRFVEEIKQSVSHIDYLILNAGV------FAL-------PYTRTVDGLETTFQVSHLSHFY 237

  Fly   177 LPGMIS---QRRGVIINVSSTAGVIPN------------PLLSVYSSTKAFVNK------FSDDL 220
            |...:.   ..:..||.:||.:....|            |....|.|..|:.|.      |:.:|
  Fly   238 LTLQLETLFDYKTRIIVLSSESHRFANLPVENLAVHHLSPPPEKYWSMMAYNNAKLCNVLFAQEL 302

  Fly   221 QTEYKEHGILIQSVQPG-FVATNMSK 245
            ...:|:.||.:.|:.|| .|::::|:
  Fly   303 AQRWKQRGISVFSLHPGNMVSSDLSR 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spideyNP_572420.1 17beta-HSD1_like_SDR_c 52..288 CDD:187614 46/221 (21%)
WwoxNP_609171.1 WW 13..43 CDD:197736
human_WWOX_like_SDR_c-like 121..402 CDD:187669 46/221 (21%)
Blue background indicates that the domain is not in the aligned region.

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