DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spidey and Ldsdh1

DIOPT Version :10

Sequence 1:NP_572420.1 Gene:spidey / 31703 FlyBaseID:FBgn0029975 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_572436.1 Gene:Ldsdh1 / 31726 FlyBaseID:FBgn0029994 Length:320 Species:Drosophila melanogaster


Alignment Length:265 Identity:69/265 - (26%)
Similarity:115/265 - (43%) Gaps:40/265 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 GEWAVVTGSTDGIGKAYAKELARRGLKLVLISRSLEKLNVVAKEI----GDKYGVEVRVIDVDFT 112
            |:..::||:..|:||..|.:.|:.|..::....:.:..|...|||    |..:|....|     |
  Fly    58 GKVVLITGTGHGMGKEMALQYAKLGATILCWDVNEQTNNQTVKEIKNNGGKAFGYVCNV-----T 117

  Fly   113 GGDEIYD---KIREKTTGLNVGVLVNNVGISYGHPEYFLDCYKADPPFLRNIVAANIHSVTHMTA 174
            ..:|:.:   |:| |..|. :.|:|||.||...||  .|:..:.:   :|.:...|:.|...:..
  Fly   118 KREELIELAQKVR-KEHGF-IHVVVNNAGIMPCHP--LLEHTENE---IRLMYEINVLSHFWIIQ 175

  Fly   175 LFLPGMISQRRGVIINVSSTAGVIPNPLLSVYSSTKAFVNKFS----DDLQTEYKEHGILIQSVQ 235
            .|||.||.:..|.|:.:||.||:.....|..|..||..|..:.    ::|:.:..::.:.:.::.
  Fly   176 AFLPDMIERNEGSIVALSSCAGLFGLINLVPYCGTKFAVRGYMAALVEELRQKNPQNNVKLTTIY 240

  Fly   236 PGFVAT-----------NMSKIRKASVFAPSPETYVRSALSTLGI-----ATQTAGYL-PHALLQ 283
            |..:.|           |:.|:..|.|.|.|.....|..|....|     |.:..|.| |...::
  Fly   241 PYMIDTGLCKNPRYRFPNLFKLIPADVAAGSIIEAQRQGLEEAAIPRHFVAAEKIGRLIPRKAMR 305

  Fly   284 LVIHF 288
            ||..|
  Fly   306 LVNDF 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spideyNP_572420.1 17beta-HSD1_like_SDR_c 52..288 CDD:187614 68/263 (26%)
Ldsdh1NP_572436.1 Rossmann-fold NAD(P)(+)-binding proteins 60..287 CDD:473865 61/238 (26%)

Return to query results.
Submit another query.