DRSC/TRiP Functional Genomics Resources

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Protein Alignment spidey and stdh-1

DIOPT Version :9

Sequence 1:NP_572420.1 Gene:spidey / 31703 FlyBaseID:FBgn0029975 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_506449.1 Gene:stdh-1 / 182291 WormBaseID:WBGene00007363 Length:314 Species:Caenorhabditis elegans


Alignment Length:285 Identity:107/285 - (37%)
Similarity:160/285 - (56%) Gaps:17/285 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 IYANVVGPKVFGSSVDLSKM--GEWAVVTGSTDGIGKAYAKELARRGLKLVLISRSLEKLNVVAK 94
            |..|::||.||...:||.|.  ..||||||:||||||:|:.|||:||..:.::||:..||....|
 Worm    25 ITLNILGPYVFCQPIDLKKKAGASWAVVTGATDGIGKSYSFELAKRGFNVYIVSRTQSKLEHTKK 89

  Fly    95 EIGDKY-GVEVRVIDVDFTGGD-EIYDKIREKTTGLNVGVLVNNVGISYGHPEYFLDCYKADPPF 157
            ||.:.: .:|||....|||... ..|:|:..|...:::|:|:||||:.:.:|| .|.........
 Worm    90 EILEVHPDIEVRFATFDFTNPSVSDYEKLLSKLNEVSIGILINNVGMFFDYPE-MLHKINGGIDS 153

  Fly   158 LRNIVAANIHSVTHMTALFLPGMISQRRGVIINVSSTAGVIPNPLLSVYSSTKAFVNKFSDDLQT 222
            :.|:...|....|.::|..||.|:.::.|:|:|:.|.||:......||||:||.:|...:..||.
 Worm   154 IANVTIINTLPATLLSAGILPQMVPRKAGIIVNIGSVAGLATMAEWSVYSATKKYVEWITGCLQK 218

  Fly   223 EYKEHGILIQSVQPGFVATNMSKIRKASVFAPSPETYVRSALSTLGIATQTAGYLPH----ALLQ 283
            ||...||:.|::.|..|||.|:.....|.|.|..:|:.:|||:|:|.|:||.||:.|    .:|:
 Worm   219 EYGHQGIIFQAITPAMVATKMAGNPNTSFFTPDSDTFAKSALNTIGHASQTTGYITHQIECEMLK 283

  Fly   284 LVIHF--------TEAVFGEQFARN 300
            |:..|        |.|...|..|:|
 Worm   284 LLPDFVIDRSIKQTSAQLREALAKN 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spideyNP_572420.1 PLN02780 8..321 CDD:166421 107/285 (38%)
17beta-HSD1_like_SDR_c 52..288 CDD:187614 92/241 (38%)
stdh-1NP_506449.1 17beta-HSD1_like_SDR_c 47..289 CDD:187614 92/242 (38%)
adh_short 49..242 CDD:278532 75/193 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167860
Domainoid 1 1.000 148 1.000 Domainoid score I2740
eggNOG 1 0.900 - - E1_COG0300
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H95094
Inparanoid 1 1.050 201 1.000 Inparanoid score I2462
Isobase 1 0.950 - 0.803099 Normalized mean entropy S1433
OMA 1 1.010 - - QHG53762
OrthoDB 1 1.010 - - D584062at33208
OrthoFinder 1 1.000 - - FOG0000465
OrthoInspector 1 1.000 - - mtm4736
orthoMCL 1 0.900 - - OOG6_100431
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X484
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.620

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