DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spidey and dhs-5

DIOPT Version :9

Sequence 1:NP_572420.1 Gene:spidey / 31703 FlyBaseID:FBgn0029975 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_495035.1 Gene:dhs-5 / 173930 WormBaseID:WBGene00000969 Length:378 Species:Caenorhabditis elegans


Alignment Length:316 Identity:101/316 - (31%)
Similarity:163/316 - (51%) Gaps:19/316 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ENNSQV-LSLLGGLAIGIVGFQVFR---KVLPWIYANVVGPKVFGSSVDLSKMGEWAVVTGSTDG 63
            ||.:|: :::|..:.:..||::::|   ..|..|:...:.|..:..::: .....|.||:|.|||
 Worm    36 ENGAQLAVTMLLLIPVVYVGYRLYRTFFAFLKAIFIYTIAPLFYKPNLE-QYQHRWTVVSGGTDG 99

  Fly    64 IGKAYAKELARRGL-KLVLISRSLEKLNVVAKEIGDKYG-VEVRVIDVDFTGGDEIYDKIREKTT 126
            |||||..|||:||| |.|||.|:.:||:.|..||.:|:. .:::....||..||  :..:|:..:
 Worm   100 IGKAYTLELAKRGLRKFVLIGRNPKKLDSVKSEIEEKHSDAQIKTFVFDFGSGD--FSSLRDYIS 162

  Fly   127 GLNVGVLVNNVGISYGHPEYFLDCYKADPPFLRNIVAANIHSVTHMTALFLPGMISQRRGVIINV 191
            .::||.:||:||....:.|.:.|....|...||    .|........:..||.|.....|.|:.:
 Worm   163 DIDVGFVVNSVGTGRDNLERYGDNPDEDTQILR----VNGMGAAEFLSCVLPPMEKSGGGQIVVL 223

  Fly   192 SSTAGVIPNPLLSVYSSTKAFVNKFSDDLQTEYKEHGILIQSVQPGFVATNMSKIRKASVFAPSP 256
            ||:.||.|.|:|:.|.:|||.:....:.:..||..  |.:|::.|..|||.|:...|.|.|..:|
 Worm   224 SSSQGVRPIPMLAAYCATKALMTFLCESIDREYST--INVQTLIPALVATKMTYYTKGSTFVVTP 286

  Fly   257 ETYVRSALSTLGIATQTAGYLPHALLQLVIHFTEAVFGEQFARNIVMKNILGTRKR 312
            |.:...|:.::|:..:|||.|.|.|..|..|    :|.....:.::|......|||
 Worm   287 ENFCHQAVGSIGLTKKTAGCLNHELQMLGFH----LFPWTILKYLIMPIYYHQRKR 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spideyNP_572420.1 PLN02780 8..321 CDD:166421 98/311 (32%)
17beta-HSD1_like_SDR_c 52..288 CDD:187614 85/237 (36%)
dhs-5NP_495035.1 17beta-HSD1_like_SDR_c 88..323 CDD:187614 87/246 (35%)
adh_short 89..274 CDD:278532 70/192 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0300
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.803099 Normalized mean entropy S1433
OMA 1 1.010 - - QHG53762
OrthoDB 1 1.010 - - D584062at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR43899
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
87.840

Return to query results.
Submit another query.