DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spidey and Hsd17b11

DIOPT Version :10

Sequence 1:NP_572420.1 Gene:spidey / 31703 FlyBaseID:FBgn0029975 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_444492.1 Gene:Hsd17b11 / 114664 MGIID:2149821 Length:298 Species:Mus musculus


Alignment Length:281 Identity:75/281 - (26%)
Similarity:123/281 - (43%) Gaps:26/281 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 KVFGSSVDLSKMGEWAVVTGSTDGIGKAYAKELARRGLKLVLISRSLEKLNVVAKEIGDKYGVEV 104
            |:|......|..||..::||:..|||:..|.|.|:...||||...:...:...|.:. .|.|.:.
Mouse    24 KLFIPKKKKSVAGEIVLITGAGHGIGRLTAYEFAKLNTKLVLWDINKNGIEETAAKC-RKLGAQA 87

  Fly   105 RVIDVDFTGGDEIYD---KIREKTTGLNVGVLVNNVGISYGHPEYFLDCYKADPPFLRNIVAANI 166
            ....||.:..:|||.   |::|:..  :|.:||||.|:     .|..|.:....|.:......|:
Mouse    88 HPFVVDCSQREEIYSAAKKVKEEVG--DVSILVNNAGV-----VYTADLFATQDPQIEKTFEVNV 145

  Fly   167 HSVTHMTALFLPGMISQRRGVIINVSSTAGVIPNPLLSVYSSTK----AFVNKFSDDLQTEYKEH 227
            .:....|..|||.|:....|.|:.|:|.||....|.|..|.|:|    .|....:|:| ......
Mouse   146 LAHFWTTKAFLPVMMKNNHGHIVTVASAAGHTVVPFLLAYCSSKFAAVGFHRALTDEL-AALGRT 209

  Fly   228 GILIQSVQPGFVATNMSKIRKASVFAPS--PETYVRSALSTLGIATQTAG-YLPHALLQLVIHFT 289
            |:....:.|.|:.|...| ..::...|:  ||..|...:.  ||.|:... ::|.::..|.:  .
Mouse   210 GVRTSCLCPNFINTGFIK-NPSTNLGPTLEPEEVVEHLMH--GILTEKQMIFVPSSIALLTV--L 269

  Fly   290 EAVFGEQFARNIVMKNILGTR 310
            |.:..|:|.:  |:|:.:..:
Mouse   270 ERIVPERFLQ--VLKHRINVK 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spideyNP_572420.1 17beta-HSD1_like_SDR_c 52..288 CDD:187614 67/245 (27%)
Hsd17b11NP_444492.1 17beta-HSDXI-like_SDR_c 38..277 CDD:187598 67/252 (27%)

Return to query results.
Submit another query.