DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpr14 and Negr1

DIOPT Version :10

Sequence 1:NP_572419.1 Gene:dpr14 / 31702 FlyBaseID:FBgn0029974 Length:340 Species:Drosophila melanogaster
Sequence 2:XP_063138498.1 Gene:Negr1 / 59318 RGDID:708416 Length:423 Species:Rattus norvegicus


Alignment Length:308 Identity:68/308 - (22%)
Similarity:109/308 - (35%) Gaps:80/308 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 FPFFADPYTTLNISTQLSSSVYLHCRVNDLQGKTVSWMRRRGDDLTLITFGQHTYSGDSRYSLEF 136
            ||:.|    ..|:..:...:..|.|.:.|...|. :|:.|.    ::|..|...:|.|.|.|:..
  Rat    34 FPWAA----VDNMLVRKGDTAVLRCYLEDGASKG-AWLNRS----SIIFAGGDKWSVDPRVSIST 89

  Fly   137 EEPNDWKLLIQFANERDEGPYECQV-SSHPPLVLLVYLTIIVPHVEILDERGSATPEKYYKAGST 200
            ....|:.|.||..:..|:|||.|.| :.|.|..:.|:||:.|| .:|.|.....|    ...|:.
  Rat    90 LNKRDYSLQIQNVDVTDDGPYTCSVQTQHTPRTMQVHLTVQVP-PKIYDISNDMT----INEGTN 149

  Fly   201 IELQCVISKIPHPSSYITWRHGPRLLNYDTSRGGISVKTDMLPGRALSRLYIANANRQDTGNYTC 265
            :.|.|:.:..|.|:  |:|||               :.....|......|.|....|...|.|.|
  Rat   150 VTLTCLATGKPEPA--ISWRH---------------ISPSAKPFENGQYLDIYGITRDQAGEYEC 197

  Fly   266 MLGNEIT------ETVVVHVL-----------------------NGEEPAAMQHANGSRQKANAS 301
            ...|:::      ..|||:..                       .|..|.|.:...|.::..|..
  Rat   198 SAENDVSFPDVKKVRVVVNFAPTIQEIKSGTVTPGRSGLIRCEGAGVPPPAFEWYKGEKRLFNGQ 262

  Fly   302 TMVVL------------------FLVYVCISGSISVAGMNRGLGLGQV 331
            ..:::                  |..|.|::.: .:...|..|.|.|:
  Rat   263 QGIIIQNFSTRSILTVTNVTQEHFGNYTCVAAN-KLGTTNASLPLNQI 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr14NP_572419.1 Ig 81..175 CDD:472250 27/94 (29%)
Ig strand B 92..96 CDD:409353 1/3 (33%)
Ig strand C 105..109 CDD:409353 0/3 (0%)
Ig strand E 142..146 CDD:409353 1/3 (33%)
Ig strand F 156..161 CDD:409353 3/4 (75%)
Ig strand G 168..171 CDD:409353 0/2 (0%)
IG_like 191..279 CDD:214653 20/93 (22%)
Ig strand B 201..205 CDD:409473 1/3 (33%)
Ig strand C 214..220 CDD:409473 1/5 (20%)
Ig strand E 248..252 CDD:409473 1/3 (33%)
Ig strand F 262..267 CDD:409473 2/4 (50%)
Negr1XP_063138498.1 None

Return to query results.
Submit another query.