DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr14 and robo4

DIOPT Version :9

Sequence 1:NP_001245573.1 Gene:dpr14 / 31702 FlyBaseID:FBgn0029974 Length:340 Species:Drosophila melanogaster
Sequence 2:XP_689255.3 Gene:robo4 / 560765 ZFINID:ZDB-GENE-020809-1 Length:1134 Species:Danio rerio


Alignment Length:211 Identity:45/211 - (21%)
Similarity:69/211 - (32%) Gaps:62/211 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 NISTQLSSSVYLHCRVNDLQGKTVSWMRRRGDDLTLITFGQHTYSGDSRY--------SLEFEEP 139
            ::..::.|...|.||.......|:.|: |.|..|       .|...|::.        ||.|   
Zfish    79 DVVVRVGSPATLSCRAEGNPEPTIQWL-RNGQPL-------DTDKMDAQSQPIVLPDGSLFF--- 132

  Fly   140 NDWKLLIQFANERDEGPYEC--------QVSSHPPLVLLVYLTIIVPHVEILDERGSATPEKYYK 196
              :.::.....:..|..|.|        ..|.:..|           |:..|.|.....|.....
Zfish   133 --FSVVPGRKGQSHEAVYACIAHNSIGNATSRNASL-----------HIAALREDFRVQPSDVEV 184

  Fly   197 A-GSTIELQCVISKIPHPSSYITWRHGPRLLN-----YDTSRGGISVKTDMLPGRALSRLYIANA 255
            | |....:.| ...:.||...:|||....|:|     |...:|               :|.||.|
Zfish   185 AIGEMATINC-SPPVGHPEPNVTWRKDGILINSSNEHYTELKG---------------KLIIAPA 233

  Fly   256 NRQDTGNYTCMLGNEI 271
            .:.|:|.|:|:..|.|
Zfish   234 QKNDSGVYSCIASNMI 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr14NP_001245573.1 IG_like 83..163 CDD:214653 17/95 (18%)
Ig 84..169 CDD:299845 19/100 (19%)
IG_like 191..279 CDD:214653 23/87 (26%)
Ig 201..274 CDD:143165 20/76 (26%)
robo4XP_689255.3 Ig1_Robo 70..169 CDD:143317 20/113 (18%)
I-set 71..168 CDD:254352 19/112 (17%)
I-set 175..261 CDD:254352 23/91 (25%)
Ig2_Robo 177..261 CDD:143201 23/89 (26%)
I-set 265..350 CDD:254352
Ig 282..350 CDD:299845
FN3 373..448 CDD:214495
FN3 472..560 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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