DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr14 and Ntm

DIOPT Version :9

Sequence 1:NP_001245573.1 Gene:dpr14 / 31702 FlyBaseID:FBgn0029974 Length:340 Species:Drosophila melanogaster
Sequence 2:XP_017451354.1 Gene:Ntm / 50864 RGDID:620958 Length:367 Species:Rattus norvegicus


Alignment Length:228 Identity:57/228 - (25%)
Similarity:91/228 - (39%) Gaps:39/228 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 FPFFADPYTTLNISTQLSSSVYLHCRVNDLQGKTVSWMRRRGDDLTLITFGQHTYSGDSRYSLEF 136
            ||...|     |::.:...|..|.|.: |.:...|:|:.|.    |::..|...:..|.|..|..
  Rat    38 FPKAMD-----NVTVRQGESATLRCTI-DNRVTRVAWLNRS----TILYAGNDKWCLDPRVVLLS 92

  Fly   137 EEPNDWKLLIQFANERDEGPYEC--QVSSHPPLVLLVYLTIIVPH-VEILDERGSATPEKYYKAG 198
            .....:.:.||..:..|||||.|  |..:||....:..:..:.|. |||       :.:.....|
  Rat    93 NTQTQYSIEIQNVDVYDEGPYTCSVQTDNHPKTSRVHLIVQVSPKIVEI-------SSDISINEG 150

  Fly   199 STIELQCVISKIPHPSSYITWRH-GPRLLNYDTSRGGISVKTDMLPGRALSRLYIANANRQDTGN 262
            :.|.|.|:.:..|.|:  :|||| .|:.:.:        |..|       ..|.|....|:.:|.
  Rat   151 NNISLTCIATGRPEPT--VTWRHISPKAVGF--------VSED-------EYLEIQGITREQSGE 198

  Fly   263 YTCMLGNEITETVVVHV-LNGEEPAAMQHANGS 294
            |.|...|::...||..| :....|..:..|.|:
  Rat   199 YECSASNDVAAPVVRRVKVTVNYPPYISEAKGT 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr14NP_001245573.1 IG_like 83..163 CDD:214653 22/81 (27%)
Ig 84..169 CDD:299845 23/86 (27%)
IG_like 191..279 CDD:214653 22/88 (25%)
Ig 201..274 CDD:143165 19/73 (26%)
NtmXP_017451354.1 Ig 44..132 CDD:416386 24/92 (26%)
Ig strand A' 44..49 CDD:409353 1/4 (25%)
Ig strand B 51..59 CDD:409353 3/7 (43%)
CDR1 59..63 CDD:409353 1/4 (25%)
FR2 64..70 CDD:409353 2/5 (40%)
Ig strand C 64..70 CDD:409353 2/5 (40%)
CDR2 71..83 CDD:409353 3/15 (20%)
Ig strand C' 72..76 CDD:409353 1/7 (14%)
Ig strand C' 80..83 CDD:409353 0/2 (0%)
FR3 84..118 CDD:409353 11/33 (33%)
Ig strand D 87..94 CDD:409353 2/6 (33%)
Ig strand E 97..103 CDD:409353 0/5 (0%)
Ig strand F 110..118 CDD:409353 5/7 (71%)
CDR3 119..123 CDD:409353 0/3 (0%)
Ig strand G 123..132 CDD:409353 1/8 (13%)
FR4 125..132 CDD:409353 0/6 (0%)
Ig_3 136..205 CDD:404760 23/92 (25%)
Ig strand A' 144..148 CDD:409353 0/3 (0%)
Ig strand B 151..160 CDD:409353 3/8 (38%)
Ig strand F 197..205 CDD:409353 3/7 (43%)
Ig 223..307 CDD:416386 2/9 (22%)
putative Ig strand A 223..229 CDD:409353 0/5 (0%)
Ig strand B 239..243 CDD:409353
Ig strand C 252..256 CDD:409353
Ig strand E 278..282 CDD:409353
Ig strand F 292..297 CDD:409353
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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