DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr14 and Dscam3

DIOPT Version :9

Sequence 1:NP_001245573.1 Gene:dpr14 / 31702 FlyBaseID:FBgn0029974 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_996226.2 Gene:Dscam3 / 42103 FlyBaseID:FBgn0261046 Length:2087 Species:Drosophila melanogaster


Alignment Length:300 Identity:65/300 - (21%)
Similarity:106/300 - (35%) Gaps:92/300 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 EFSSPFTDTPEDEE-------LEVTE-------TTTHEPFPFFADPYTTLNISTQLSSSVYLHCR 97
            :||...|:|...|.       |:|.|       .||.:|         .:.|..:..:.|:|.|.
  Fly   214 KFSCLVTNTLNGERQRSDAVMLQVKELSKNLAPRTTQKP---------VMEIHVERGNDVHLPCN 269

  Fly    98 VNDLQGKTVSWMRRRGDDLTLITFGQHTYSGDSRYSLEFEEPNDWKLLIQFANERDEGPYECQVS 162
            :........:|. |..|...|     :......|..|     :...|||:.|:|||.|.:.||.|
  Fly   270 IQGNPFPIFTWY-RVSDSAAL-----YPIPSSQRVIL-----SRTLLLIKNADERDAGKWICQAS 323

  Fly   163 S-------HPPLVLLVYLTI-IVPHVEILDERGSATPEKYYKAGSTIELQCVISKIPHPSSYITW 219
            :       ...|.:..|::: |:|.|:|::..|:|. ......||.|:.             |.|
  Fly   324 NQFGEQRIEIRLSVNSYVSVHILPQVQIVNSGGTAN-FNCTTTGSAIDA-------------IDW 374

  Fly   220 RHGPRLLNYDTSRGGISVKTDMLPGRALSRLYIANANRQDTGNYTCMLGNEITETVVVHVLNGEE 284
            .|..:.|.   :...::...|.:...:.|.|.:.|..|:|.|.|.|::.|               
  Fly   375 LHNGKPLQ---ANNALTTGRDNIRFLSKSSLLVQNVGRRDRGVYQCLVEN--------------- 421

  Fly   285 PAAMQHANGSRQKANASTMVVL-------FLVYVCISGSI 317
                       |:|:|..|..|       .|:|..|..::
  Fly   422 -----------QRASAQAMAELKLGDTVPELIYTFIEQNV 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr14NP_001245573.1 IG_like 83..163 CDD:214653 20/79 (25%)
Ig 84..169 CDD:299845 22/91 (24%)
IG_like 191..279 CDD:214653 17/87 (20%)
Ig 201..274 CDD:143165 15/72 (21%)
Dscam3NP_996226.2 IG 56..133 CDD:214652
Ig 56..125 CDD:143165
I-set 246..337 CDD:254352 25/110 (23%)
Ig 264..334 CDD:143165 20/80 (25%)
I-set 345..433 CDD:254352 27/130 (21%)
Ig 358..431 CDD:143165 22/115 (19%)
Ig 456..533 CDD:143165
IGc2 553..619 CDD:197706
I-set 634..724 CDD:254352
ig 645..712 CDD:278476
IG_like 734..815 CDD:214653
Ig 745..815 CDD:299845
I-set 820..913 CDD:254352
Ig 838..920 CDD:299845
FN3 917..1033 CDD:238020
FN3 1040..1142 CDD:238020
fn3 1150..1237 CDD:278470
FN3 1263..1345 CDD:238020
Ig 1350..1436 CDD:299845
IG_like 1358..1436 CDD:214653
FN3 1441..1530 CDD:238020
FN3 1542..1620 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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