DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr14 and dscamb

DIOPT Version :9

Sequence 1:NP_001245573.1 Gene:dpr14 / 31702 FlyBaseID:FBgn0029974 Length:340 Species:Drosophila melanogaster
Sequence 2:XP_009289749.1 Gene:dscamb / 386937 ZFINID:ZDB-GENE-031118-67 Length:2020 Species:Danio rerio


Alignment Length:211 Identity:51/211 - (24%)
Similarity:82/211 - (38%) Gaps:44/211 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 NISTQLSSSVYLHCRVNDLQGKTVSWMRRRGDDLTLITFGQHTYSGDSRYSLEFEEPNDWKLLIQ 147
            |::.......|:|||:......::.|.:    |..|:.|.....:        ||  |:..|.:.
Zfish   512 NVTAIAGRDTYIHCRIIGYPYYSIKWYK----DSNLLPFNHRQRA--------FE--NNGTLKLS 562

  Fly   148 FANERDEGPYECQVSSHPPLVL--LVYLTIIVPHVEILDERGSATPEKYYKAGSTIELQCVISKI 210
            .....|||.|.|.|...|...:  .|::|:.||.:....:..||:      .|..:.:.||:...
Zfish   563 NVQNSDEGEYTCYVLVDPEKQIHRSVHVTVKVPPLIQHSDSQSAS------IGQRVFIPCVVISG 621

  Fly   211 PHPSSYITWRHGPRLLNYDTSRGGISVKTDMLPGRALSRLYIANANRQDTGNYTCMLGNEITETV 275
            ..|.| |||....|.:|     ..:.|..|.:.  ..|.|.|:|.:....|:|||:..|      
Zfish   622 DLPMS-ITWHKDGRPIN-----ASLGVTIDNID--FTSSLRISNLSEIHNGSYTCIARN------ 672

  Fly   276 VVHVLNGEEPAAMQHA 291
                    |.||::|:
Zfish   673 --------EAAAVEHS 680

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr14NP_001245573.1 IG_like 83..163 CDD:214653 19/79 (24%)
Ig 84..169 CDD:299845 19/84 (23%)
IG_like 191..279 CDD:214653 21/87 (24%)
Ig 201..274 CDD:143165 20/72 (28%)
dscambXP_009289749.1 I-set 132..198 CDD:254352
I-set 225..310 CDD:254352
IGc2 239..300 CDD:197706
IG_like 320..400 CDD:214653
IGc2 328..391 CDD:197706
IG_like 417..501 CDD:214653
Ig 424..498 CDD:143165
IG_like 511..592 CDD:214653 21/93 (23%)
IGc2 518..576 CDD:197706 17/71 (24%)
I-set 595..685 CDD:254352 28/114 (25%)
Ig 612..682 CDD:143165 24/91 (26%)
I-set 689..785 CDD:254352
Ig7_DSCAM 706..785 CDD:143211
IG_like 795..883 CDD:214653
Ig 803..890 CDD:299845
FN3 887..980 CDD:238020
FN3 987..1084 CDD:238020
FN3 1092..1185 CDD:238020
FN3 1190..1279 CDD:238020
IGc2 1302..1367 CDD:197706
FN3 1398..1471 CDD:238020
FN3 1485..1557 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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