DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr14 and Jaml

DIOPT Version :9

Sequence 1:NP_001245573.1 Gene:dpr14 / 31702 FlyBaseID:FBgn0029974 Length:340 Species:Drosophila melanogaster
Sequence 2:XP_038938277.1 Gene:Jaml / 315610 RGDID:1562572 Length:379 Species:Rattus norvegicus


Alignment Length:281 Identity:61/281 - (21%)
Similarity:103/281 - (36%) Gaps:68/281 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 TTLNISTQLSSSVYLHCRVNDLQGK---TVSWMRRRGD----DLTLITFGQHTYSGDSRYSLEFE 137
            ::|.:...:..|..:.|.|...:.|   .|.|:..:|:    :..|     :.||..|..:..|:
  Rat    29 SSLKLRVHVGESALMGCVVQSTEEKPVDKVDWVFSKGEHAENEYVL-----YYYSSLSVPTGRFQ 88

  Fly   138 E---------PNDWKLLIQFANERDEGPYECQV------SSHPPLVLLVYLTIIVPHVEILDERG 187
            .         .||..||:|...:.|||.|.|::      |.....|||          .:|.|. 
  Rat    89 NRSRLVGDLLRNDGSLLLQDVQKADEGIYTCEIRLKNEGSVSKKFVLL----------HVLPEE- 142

  Fly   188 SATPEKYYKAGSTIELQCVI-SKIPHPSSYITW-----RHGPR--LLNYDTS------------R 232
              ..|.....|..|::.|.. |......:.:.|     :|...  :|:||.:            |
  Rat   143 --PKELRVHVGDPIQMGCFFRSTEERRVTRVNWMFSSGKHAQEEIVLSYDFNMHSGTFQGQGRFR 205

  Fly   233 GGISVKTDMLPGRALSRLYIANANRQDTGNYTC--MLGN-EITETVVVHVLNGEEPAAMQ---HA 291
            ..:.:..|:  .|....:.:....:.|.|.|||  .||. |..:|:|:||:..|.|.::.   ..
  Rat   206 NRVDLTGDI--SRNDGSIMLQTVKKSDQGVYTCSIYLGKLESRKTIVLHVIQDESPRSISTTTET 268

  Fly   292 NGSRQKANASTMVVLFLVYVC 312
            .|.:|.......:|:.:..||
  Rat   269 AGKQQGILDGNQLVIIVGIVC 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr14NP_001245573.1 IG_like 83..163 CDD:214653 22/101 (22%)
Ig 84..169 CDD:299845 23/106 (22%)
IG_like 191..279 CDD:214653 23/110 (21%)
Ig 201..274 CDD:143165 19/95 (20%)
JamlXP_038938277.1 V-set 33..139 CDD:400157 26/120 (22%)
FR2 58..69 CDD:409353 3/10 (30%)
CDR2 70..82 CDD:409353 3/16 (19%)
Ig strand C' 71..77 CDD:409353 1/10 (10%)
Ig strand C' 78..82 CDD:409353 1/3 (33%)
FR3 87..121 CDD:409353 11/33 (33%)
Ig strand D 90..96 CDD:409353 0/5 (0%)
Ig strand E 100..108 CDD:409353 4/7 (57%)
Ig strand F 115..122 CDD:409353 3/6 (50%)
V-set 141..253 CDD:400157 24/116 (21%)
Ig strand A' 144..150 CDD:409353 1/5 (20%)
Ig strand B 152..162 CDD:409353 2/9 (22%)
CDR1 162..169 CDD:409353 1/6 (17%)
Ig strand C 169..176 CDD:409353 1/6 (17%)
FR2 170..181 CDD:409353 1/10 (10%)
CDR2 182..196 CDD:409353 3/13 (23%)
Ig strand C' 183..189 CDD:409353 1/5 (20%)
Ig strand C' 191..196 CDD:409353 0/4 (0%)
FR3 204..238 CDD:409353 8/35 (23%)
Ig strand D 207..213 CDD:409353 0/5 (0%)
Ig strand E 217..225 CDD:409353 0/7 (0%)
Ig strand F 232..238 CDD:409353 4/5 (80%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 48 1.000 Inparanoid score I5388
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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