DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr14 and ncam1a

DIOPT Version :9

Sequence 1:NP_001245573.1 Gene:dpr14 / 31702 FlyBaseID:FBgn0029974 Length:340 Species:Drosophila melanogaster
Sequence 2:XP_009293555.1 Gene:ncam1a / 30447 ZFINID:ZDB-GENE-990415-31 Length:1010 Species:Danio rerio


Alignment Length:220 Identity:51/220 - (23%)
Similarity:85/220 - (38%) Gaps:46/220 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 PFFADPYTTLNISTQLSSSVYLHCRVNDLQGKTVSWMRRRGDDLTLITFGQHTYSGDSRYSLEFE 137
            |.....||.||.:..::.:|.|.|..:.....||.|.|           |......|.:|||. |
Zfish   209 PSIRTRYTELNATADINQAVTLACHADGYPEPTVKWAR-----------GNTELESDEKYSLN-E 261

  Fly   138 EPNDWKLLIQFANERDEGPYECQVSS-----HPPLVLLVYLTIIVPHVEILDERGSATPEKYYKA 197
            :.::  |.|:..|:.|||.|:|...:     ...:.|.|:   :.|.:..|:.:.::..|:    
Zfish   262 DGSE--LTIKDVNKLDEGDYKCIARNKAGERSEEVTLNVF---VQPKITFLENQTASELEE---- 317

  Fly   198 GSTIELQCVISKIPHPSSYITWRHGPRLL------------NYDTSRGGISVKTDMLPGRALSRL 250
              .|.|.|..:..|.|:  |.|..|.|:.            .:.:..|.:.|::|    ..:|.|
Zfish   318 --QITLTCEATGDPTPN--IIWSFGRRVFTENEQASWTRPEKHKSLDGNVVVRSD----ARVSSL 374

  Fly   251 YIANANRQDTGNYTCMLGNEITETV 275
            .:......|.|.|.|...|.|.:.:
Zfish   375 TLKYVQFTDAGQYLCTARNSIGQDI 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr14NP_001245573.1 IG_like 83..163 CDD:214653 22/79 (28%)
Ig 84..169 CDD:299845 21/89 (24%)
IG_like 191..279 CDD:214653 21/97 (22%)
Ig 201..274 CDD:143165 20/84 (24%)
ncam1aXP_009293555.1 Ig 20..112 CDD:299845
I-set 21..111 CDD:254352
IG_like 121..200 CDD:214653
IGc2 128..189 CDD:197706
Ig 208..301 CDD:299845 28/108 (26%)
IG_like 219..298 CDD:214653 23/92 (25%)
Ig 300..406 CDD:299845 23/112 (21%)
IG_like 308..406 CDD:214653 21/104 (20%)
ig 413..498 CDD:278476
IG_like 415..498 CDD:214653
fn3 505..589 CDD:278470
FN3 624..715 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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