DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr14 and Lrit3

DIOPT Version :9

Sequence 1:NP_001245573.1 Gene:dpr14 / 31702 FlyBaseID:FBgn0029974 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_001274153.1 Gene:Lrit3 / 242235 MGIID:2685267 Length:681 Species:Mus musculus


Alignment Length:431 Identity:74/431 - (17%)
Similarity:128/431 - (29%) Gaps:151/431 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 TFPKNFWQEFS--------SP----------------FTDTPEDEELEVTETTTH-----EPFPF 74
            |.|.:|...:|        ||                |.|....:.:|:::.|.|     :|...
Mouse   167 TLPPDFLDSWSHLAVTPSRSPDFPPRRIILGLQDNPWFCDCHISKVIELSKVTDHAVVLLDPLMV 231

  Fly    75 FADP----------------------YTTLNISTQLSSSVYLHCRVNDLQGKTVSWMRRRGDDLT 117
            .::|                      .:...|::.|.|:|.|.|.........::|.|..|..: 
Mouse   232 CSEPERFQGILFQRVELEKCLKPSVMMSATKITSALGSNVLLRCDAKGHPTPQLTWTRSDGSTV- 295

  Fly   118 LITFGQHTYSGDSRYSLEFEEPND---WKLL-IQFANERDEGPYECQVSSHPPLVLLVYLTIIVP 178
                         .|::..|.|.:   |.:: :...:.:|.|.|.|:..:...:...|....:|.
Mouse   296 -------------NYTVIQESPGEGIRWSIISLTSISHKDAGDYRCKAKNLAGISEAVVTVTVVG 347

  Fly   179 HVEIL-----DERGSATPEKYYK----AGSTIELQCVIS-------KIPHPSSYI---TWRHGPR 224
            .|...     .||....|.:.:.    .|||...:..:|       ..|.||:.:   ||...|.
Mouse   348 GVTTTLSPDSSERSPGEPPEQHPQPGLGGSTPPSKSWLSPGLTSAPSYPTPSAALYTSTWSPPPS 412

  Fly   225 LL-----------NYDTSRGGISVKTDMLP----------------GRALSRLYIANANR----- 257
            .|           :..||..|.:.:|...|                ||....|..:....     
Mouse   413 SLPPIFSAASATTSVQTSISGRTARTSHQPPLLHPGGKSNAKIEKNGRKFPPLSASKKEELALLD 477

  Fly   258 -----------------QDTGNYTCMLGNEITET-----VVVHVLNGEEPAAMQHAN--GSRQKA 298
                             ::||....::.|..:.|     .|::...||:...:.:|:  |..|..
Mouse   478 QAAPMETNVTIKDLRVARETGVSVTLMWNSSSSTQESSVTVLYSKYGEKDLLLVNADDYGKNQAT 542

  Fly   299 -NASTMVVLFLVYVCISG-----SISVA-GMNRGLGLGQVW 332
             |.......::..||..|     .:.:. ..||..|.|..|
Mouse   543 INGLEPGSQYVACVCPKGVGPREDLCITFSTNRVEGRGSQW 583

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
dpr14NP_001245573.1 IG_like 83..163 CDD:214653 17/83 (20%)
Ig 84..169 CDD:299845 17/88 (19%)
IG_like 191..279 CDD:214653 25/155 (16%)
Ig 201..274 CDD:143165 19/131 (15%)
Lrit3NP_001274153.1 LRR 1. /evidence=ECO:0000255 56..79
LRR_8 61..117 CDD:290566
LRR 2. /evidence=ECO:0000255 80..103
leucine-rich repeat 83..106 CDD:275378
LRR 3. /evidence=ECO:0000255 104..128
LRR_8 105..165 CDD:290566
LRR_4 106..146 CDD:289563
leucine-rich repeat 107..130 CDD:275378
LRR_4 129..170 CDD:289563 1/2 (50%)
LRR 4. /evidence=ECO:0000255 129..151
leucine-rich repeat 131..154 CDD:275378
LRR 5. /evidence=ECO:0000255 152..175 3/7 (43%)