DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bys and trmt12

DIOPT Version :9

Sequence 1:NP_511074.1 Gene:bys / 31701 FlyBaseID:FBgn0010292 Length:436 Species:Drosophila melanogaster
Sequence 2:XP_004916819.1 Gene:trmt12 / 100380191 XenbaseID:XB-GENE-992761 Length:451 Species:Xenopus tropicalis


Alignment Length:332 Identity:56/332 - (16%)
Similarity:100/332 - (30%) Gaps:123/332 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 QPAQEGKRTLHLSKMIMQKIQEKEADIHTKISDEGSLKIEEIDPKVKEMYEGVRDVLKRYRSGKI 181
            :|.....:|.||  :.|:..:::..|:...:::..      ...:.:|..|.|..:..|||:.|:
 Frog    30 RPKCSDLKTCHL--LGMELSEDRNIDVPAVLTESC------FSQRYREHLEKVGILDGRYRAQKL 86

  Fly   182 PKAFKIIPKLRN----------------------------------------------------- 193
            |.....:|.|.|                                                     
 Frog    87 PGGTVALPVLENKLSVSLVVDLMEIVAPGSSCREMLIRNPVLSKRAAVKSPAQTLRNNVYKLLES 151

  Fly   194 ----WEQILFITEPHNWS--------AAAMFQ-------GTRIFCSVLSQAMAQRFYNLVLLPRV 239
                |.:.|....|.:|.        :...|:       |..::.||.|...|.|   |....||
 Frog   152 HGLTWGRDLECDLPRSWQRHGDLVVLSEDCFRDPVWGQLGNELWVSVASSLGAGR---LAKQGRV 213

  Fly   240 RDDLCEYKKLNM---------HLYNALKRALFKPAAFMKGIILPLLEGGDCTLREAI----IFGS 291
            .||......:.:         |:.|.::        :...|...:...|:.|.::.:    ..|.
 Frog   214 MDDGVRSPNVTLLLGENGWVEHVDNGIR--------YTFDITKCMFSAGNITEKQRVASLSCHGE 270

  Fly   292 VV-------ARSSIPVL-HSSACLLKICEMAYSGANSIFIRYFLDKRYALPYRVVDAAVFHFLRF 348
            ||       ...::|.| |:.|..:..||......:::       |:..:..||.|....|    
 Frog   271 VVVDLYSGIGYFTLPYLVHAGASFVHACEWNPHAVSAL-------KKNLVINRVSDKCHIH---- 324

  Fly   349 ENDKREL 355
            |.|.|:|
 Frog   325 EGDNRQL 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bysNP_511074.1 Bystin 128..412 CDD:283057 53/321 (17%)
trmt12XP_004916819.1 Trm5 54..447 CDD:225318 50/306 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165166303
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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