DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS6 and RPS6B

DIOPT Version :10

Sequence 1:NP_511073.1 Gene:RpS6 / 31700 FlyBaseID:FBgn0261592 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_009740.3 Gene:RPS6B / 852479 SGDID:S000000385 Length:236 Species:Saccharomyces cerevisiae


Alignment Length:237 Identity:141/237 - (59%)
Similarity:188/237 - (79%) Gaps:2/237 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQ 65
            ||||:|||..|.||.||:.|||::|||::||:||.|:.:.:|||:|||..:|:||||||||||||
Yeast     1 MKLNISYPVNGSQKTFEIDDEHRIRVFFDKRIGQEVDGEAVGDEFKGYVFKISGGNDKQGFPMKQ 65

  Fly    66 GVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIP 130
            |||...|::|||.|..|||||||.||||||||||.||..:::|||||::||||:::.||||||:|
Yeast    66 GVLLPTRIKLLLTKNVSCYRPRRDGERKRKSVRGAIVGPDLAVLALVIVKKGEQELEGLTDTTVP 130

  Fly   131 RRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPAKDNKKATSKAPKIQRLITPVVLQRKHRRIAL 195
            :|||||||:.|||.:.||||||||.||:||.:  ...:|..:||||||||:||..||||..:.||
Yeast   131 KRLGPKRANNIRKFFGLSKEDDVRDFVIRREV--TKGEKTYTKAPKIQRLVTPQRLQRKRHQRAL 193

  Fly   196 KKKRQIASKEASADYAKLLVQRKKESKAKREEAKRRRSASIR 237
            |.:...|.:||:|:||:||.:|..|.||::.|.::||::|::
Yeast   194 KVRNAQAQREAAAEYAQLLAKRLSERKAEKAEIRKRRASSLK 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS6NP_511073.1 Ribosomal_S6e 1..222 CDD:469996 135/220 (61%)
RPS6BNP_009740.3 Ribosomal_S6e 1..220 CDD:469996 135/220 (61%)

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