DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS6 and rps6

DIOPT Version :9

Sequence 1:NP_511073.1 Gene:RpS6 / 31700 FlyBaseID:FBgn0261592 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_001003728.1 Gene:rps6 / 445028 ZFINID:ZDB-GENE-040801-8 Length:249 Species:Danio rerio


Alignment Length:250 Identity:186/250 - (74%)
Similarity:216/250 - (86%) Gaps:3/250 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQ 65
            ||||:|:||||||||.||.||.|||:||||||...|.||.||||||||.:||:||||||||||||
Zfish     1 MKLNISFPATGCQKLIEVDDERKLRIFYEKRMATEVAADSLGDEWKGYVVRISGGNDKQGFPMKQ 65

  Fly    66 GVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIP 130
            ||||||||||||.|||||||||||||||||||||||||||:|||.||:::|||||||||||:|:|
Zfish    66 GVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVRKGEKDIPGLTDSTVP 130

  Fly   131 RRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPAKDNKKATSKAPKIQRLITPVVLQRKHRRIAL 195
            |||||||||:||||:|||||||||::|||||| .|:.||..:||||||||:||.|||.|.|||||
Zfish   131 RRLGPKRASRIRKLFNLSKEDDVRQYVVRRPL-TKEGKKPRTKAPKIQRLVTPRVLQHKRRRIAL 194

  Fly   196 KKKRQIASKEASADYAKLLVQRKKESKAKREE--AKRRRSASIRESKSSVSSDKK 248
            |::|.:.:|||:|:|.|||.:|.||:|.||:|  |||||.:|:|.|.|...|.:|
Zfish   195 KRQRTLKNKEAAAEYTKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESSQK 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS6NP_511073.1 Ribosomal_S6e 1..222 CDD:294602 171/220 (78%)
rps6NP_001003728.1 Ribosomal_S6e 1..215 CDD:294602 168/214 (79%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170575816
Domainoid 1 1.000 224 1.000 Domainoid score I2496
eggNOG 1 0.900 - - E1_COG2125
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H85949
Inparanoid 1 1.050 372 1.000 Inparanoid score I2077
OMA 1 1.010 - - QHG53585
OrthoDB 1 1.010 - - D1326714at2759
OrthoFinder 1 1.000 - - FOG0003187
OrthoInspector 1 1.000 - - oto38945
orthoMCL 1 0.900 - - OOG6_100737
Panther 1 1.100 - - LDO PTHR11502
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1248
SonicParanoid 1 1.000 - - X2145
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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