DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS6 and rps6

DIOPT Version :10

Sequence 1:NP_511073.1 Gene:RpS6 / 31700 FlyBaseID:FBgn0261592 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_001003728.1 Gene:rps6 / 445028 ZFINID:ZDB-GENE-040801-8 Length:249 Species:Danio rerio


Alignment Length:250 Identity:186/250 - (74%)
Similarity:216/250 - (86%) Gaps:3/250 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQ 65
            ||||:|:||||||||.||.||.|||:||||||...|.||.||||||||.:||:||||||||||||
Zfish     1 MKLNISFPATGCQKLIEVDDERKLRIFYEKRMATEVAADSLGDEWKGYVVRISGGNDKQGFPMKQ 65

  Fly    66 GVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIP 130
            ||||||||||||.|||||||||||||||||||||||||||:|||.||:::|||||||||||:|:|
Zfish    66 GVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVRKGEKDIPGLTDSTVP 130

  Fly   131 RRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPAKDNKKATSKAPKIQRLITPVVLQRKHRRIAL 195
            |||||||||:||||:|||||||||::|||||| .|:.||..:||||||||:||.|||.|.|||||
Zfish   131 RRLGPKRASRIRKLFNLSKEDDVRQYVVRRPL-TKEGKKPRTKAPKIQRLVTPRVLQHKRRRIAL 194

  Fly   196 KKKRQIASKEASADYAKLLVQRKKESKAKREE--AKRRRSASIRESKSSVSSDKK 248
            |::|.:.:|||:|:|.|||.:|.||:|.||:|  |||||.:|:|.|.|...|.:|
Zfish   195 KRQRTLKNKEAAAEYTKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESSQK 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS6NP_511073.1 Ribosomal_S6e 1..222 CDD:469996 171/220 (78%)
rps6NP_001003728.1 Ribosomal_S6e 1..215 CDD:469996 168/214 (79%)

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