DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS6 and rps602

DIOPT Version :9

Sequence 1:NP_511073.1 Gene:RpS6 / 31700 FlyBaseID:FBgn0261592 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_594138.1 Gene:rps602 / 2543581 PomBaseID:SPAPB1E7.12 Length:239 Species:Schizosaccharomyces pombe


Alignment Length:239 Identity:146/239 - (61%)
Similarity:189/239 - (79%) Gaps:1/239 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQ 65
            ||||:||||.|.|||.|:.|:.:||||.||||||.|..|.:|.|:.||..:|.||||||||||.|
pombe     1 MKLNISYPANGTQKLIEIDDDRRLRVFMEKRMGQEVPGDSVGPEFAGYVFKITGGNDKQGFPMFQ 65

  Fly    66 GVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIP 130
            |||...||||||:.||.||||||.|||||||||||||..:::||||.::|:||:|||||||.|:|
pombe    66 GVLLPHRVRLLLRAGHPCYRPRRDGERKRKSVRGCIVGQDLAVLALAIVKQGEQDIPGLTDVTVP 130

  Fly   131 RRLGPKRASKIRKLYNLSKEDDVRRFVVRRP-LPAKDNKKATSKAPKIQRLITPVVLQRKHRRIA 194
            :|||||||||||:.:|||||||||:||:||. :|.|:.||..:||||||||:||..||.|..|.|
pombe   131 KRLGPKRASKIRRFFNLSKEDDVRQFVIRREVVPKKEGKKPYTKAPKIQRLVTPRTLQHKRHRFA 195

  Fly   195 LKKKRQIASKEASADYAKLLVQRKKESKAKREEAKRRRSASIRE 238
            ||:::...::|.:|::|:|:.:|..|:|.|:|..|.||::|:::
pombe   196 LKRRQAEKNREEAAEFAQLMAKRVAEAKQKKEVVKARRASSMKK 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS6NP_511073.1 Ribosomal_S6e 1..222 CDD:294602 139/221 (63%)
rps602NP_594138.1 Ribosomal_S6e 1..217 CDD:294602 137/215 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 179 1.000 Domainoid score I820
eggNOG 1 0.900 - - E1_COG2125
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H85949
Inparanoid 1 1.050 301 1.000 Inparanoid score I603
OMA 1 1.010 - - QHG53585
OrthoFinder 1 1.000 - - FOG0003187
OrthoInspector 1 1.000 - - otm47093
orthoMCL 1 0.900 - - OOG6_100737
Panther 1 1.100 - - LDO PTHR11502
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1248
SonicParanoid 1 1.000 - - X2145
TreeFam 1 0.960 - -
1413.860

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