DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS6 and rps-6

DIOPT Version :9

Sequence 1:NP_511073.1 Gene:RpS6 / 31700 FlyBaseID:FBgn0261592 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_493435.1 Gene:rps-6 / 173260 WormBaseID:WBGene00004475 Length:246 Species:Caenorhabditis elegans


Alignment Length:250 Identity:148/250 - (59%)
Similarity:183/250 - (73%) Gaps:7/250 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQ 65
            |:||.:|||||.||.|||.:|.|||:|:||||.|.|..|.||||||||.:||.||||||||||||
 Worm     1 MRLNFAYPATGLQKSFEVDEEKKLRLFFEKRMSQEVAIDALGDEWKGYVVRIGGGNDKQGFPMKQ 65

  Fly    66 GVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIP 130
            |:||:||||||||||.||||.|:.||||||||||||||||||.|:||::|||:.:|.||||:.:|
 Worm    66 GILTNGRVRLLLKKGQSCYRERKNGERKRKSVRGCIVDANMSALSLVIVKKGDGEIEGLTDSVLP 130

  Fly   131 RRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPAKDNKKATSKAPKIQRLITPVVLQRKHRRIAL 195
            |:||||||||||||:||:|.|||.::|:.......|....|. ||||||||||..:.||...:..
 Worm   131 RKLGPKRASKIRKLFNLTKHDDVTKYVITHDKTFPDGVTKTI-APKIQRLITPARIARKKYLLRQ 194

  Fly   196 KKKRQIASKEASADYAKLLVQRKKESKAKREEAK--RRRSASIRESKSSVSSDKK 248
            |:.::|..::.:|.|.|||.:..||    ..:||  ||||::...|:|.|....|
 Worm   195 KRNQKIKMRDDAAAYHKLLAKYSKE----EHDAKIARRRSSASHHSESEVKKTSK 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS6NP_511073.1 Ribosomal_S6e 1..222 CDD:294602 138/220 (63%)
rps-6NP_493435.1 Ribosomal_S6e 1..219 CDD:294602 136/218 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157434
Domainoid 1 1.000 197 1.000 Domainoid score I1822
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H85949
Inparanoid 1 1.050 282 1.000 Inparanoid score I1750
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53585
OrthoDB 1 1.010 - - D1326714at2759
OrthoFinder 1 1.000 - - FOG0003187
OrthoInspector 1 1.000 - - oto19540
orthoMCL 1 0.900 - - OOG6_100737
Panther 1 1.100 - - LDO PTHR11502
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1248
SonicParanoid 1 1.000 - - X2145
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.940

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