DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS6 and RpS6

DIOPT Version :10

Sequence 1:NP_511073.1 Gene:RpS6 / 31700 FlyBaseID:FBgn0261592 Length:248 Species:Drosophila melanogaster
Sequence 2:XP_001237411.2 Gene:RpS6 / 1273045 VectorBaseID:AGAMI1_006478 Length:435 Species:Anopheles gambiae


Alignment Length:248 Identity:170/248 - (68%)
Similarity:206/248 - (83%) Gaps:5/248 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKLNVSYPATGCQKLFEV-VDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMK 64
            ||||||:||||.||.||: .|:||||.||:||||..:.||.||:|||||.|:|||||||||||||
Mosquito     1 MKLNVSFPATGAQKTFEIPSDDHKLRHFYDKRMGTEIGADHLGEEWKGYILKIAGGNDKQGFPMK 65

  Fly    65 QGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTI 129
            |||||:.|||||||||||||||||.||||||||||||||.|:|.||||:::|||||||||||..:
Mosquito    66 QGVLTNTRVRLLLKKGHSCYRPRRAGERKRKSVRGCIVDQNLSALALVIVRKGEKDIPGLTDVNV 130

  Fly   130 PRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPAKDNKKATSKAPKIQRLITPVVLQRKHRRIA 194
            ||||||||||.||||||||||||||.:||:||||.|:.:|...|:|||||||||||||||..|:.
Mosquito   131 PRRLGPKRASNIRKLYNLSKEDDVRHYVVKRPLPVKEGQKPRFKSPKIQRLITPVVLQRKRHRLL 195

  Fly   195 LKKKRQIASKEASADYAKLLVQRKKESKAKREEAKRRRSASIRESKSSVSSDK 247
            :||:|..|.:||.:.|::||..|:::.:.:|..    |.:|||:|:||::|:|
Mosquito   196 IKKRRSEARREAESQYSRLLALRRRQERVRRHS----RLSSIRDSRSSLTSEK 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS6NP_511073.1 Ribosomal_S6e 1..222 CDD:469996 160/221 (72%)
RpS6XP_001237411.2 Ribosomal_S6e 1..216 CDD:469996 159/215 (74%)

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