DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment p115 and GC6

DIOPT Version :10

Sequence 1:NP_572417.1 Gene:p115 / 31698 FlyBaseID:FBgn0040087 Length:836 Species:Drosophila melanogaster
Sequence 2:NP_566820.1 Gene:GC6 / 822375 AraportID:AT3G27530 Length:914 Species:Arabidopsis thaliana


Alignment Length:901 Identity:240/901 - (26%)
Similarity:417/901 - (46%) Gaps:136/901 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LKSGIKTVLGSTEPGQQPSAAET-VEKLVDRVYSSTLLEDRRDACRALKAL---SRKYRIEVGAQ 64
            |.|..|.|:|......|.|..:: :::|:||:.:.||.:|||.|...|:::   |...::..||.
plant     3 LASRYKGVVGMVFGDNQSSNEDSYIQRLLDRISNGTLPDDRRTAIVELQSVVAESNAAQLAFGAA 67

  Fly    65 GMPPLVQVLQNDGQDAEIISYALDTLCNVVTSEEFDEEADNPTVSVNVGEQFTEMFIKTPEHVTL 129
            |.|.:|.:|::...|.|::..||:||...:|.   .:.|......|......:::..:..|::||
plant    68 GFPVIVGILKDQRDDLEMVRGALETLLGALTP---IDHARAQKTEVQAALMNSDLLSREAENITL 129

  Fly   130 VMGYLDEYDFRVRRAAIQLITSLISNKTRELQDLILVSPMGVSKLMDLLTDSREVIRNDVLLLLI 194
            ::..|:|.||.||...:|::|:|:.|....||:.||.:|.|:::|||:|.| ||||||:.||||.
plant   130 LLSLLEEEDFYVRYYTLQILTALLMNSQNRLQEAILTTPRGITRLMDMLMD-REVIRNEALLLLT 193

  Fly   195 ELTKGNSNIQKIVAFENAFDRLFEIVREEGCSDGGIVVEDCLILLLNLLKNNSSNQQFFKEGSYI 259
            .||:....|||||.||.||:::|.|::|||.|||.:||:|||.||.|||:::||||...:|....
plant   194 HLTREAEEIQKIVVFEGAFEKIFSIIKEEGGSDGDVVVQDCLELLNNLLRSSSSNQILLRETMGF 258

  Fly   260 QRLSPMFELSQDAEEVGWSPQKVSNFHCLLQVVRALV------TPSNQQQVVAACQRVMQKSRLL 318
            :.:..:.:|.....:  ::.||..|....|:.:..|:      .|......:|....::||..|.
plant   259 EPIISILKLRGITYK--FTQQKTVNLLSALETINMLIMGRADTEPGKDSNKLANRTVLVQKKLLD 321

  Fly   319 HALCEILMSSGVPADILTETINAVAEVVRGDRDNQDEL-GRVMAPSSPPRPAI-----VVLLMSM 377
            :.|...:.|...|..:...|...:.:::.|...|:|.| .:|:.......||:     ::|..|.
plant   322 YLLMLGVESQWAPVAVRCMTFKCIGDLIDGHPKNRDILASKVLGEDRQVEPALNSILRIILQTSS 386

  Fly   378 INEKQLLALRCAVLYCFECFLYRNADGQRAVVQTLLP-------SSASDVSALSTGQLLCTGLFS 435
            |.|      ..|..|.|:.|..:|.:||..:..||:|       ....|...:|.|.:|..||.|
plant   387 IQE------FVAADYVFKTFCEKNTEGQTMLASTLIPQPHPTSRDHLEDDVHMSFGSMLLRGLCS 445

  Fly   436 TDA---LANWFSAVALM-HSLVENVALKEELLRVLLATP----GGQKP-----ITLLEQCTNLMQ 487
            .:|   |.....|.::: |.:.:|:..||:.|:::|.:|    |..:|     :..|...:::..
plant   446 GEADGDLETCCRAASILSHVVKDNLRCKEKALKIVLESPMPSMGTPEPLFQRIVRYLAVASSMKS 510

  Fly   488 QERYRLQSKVG-------LLMLLSLWLAHCPGAVKALLETQGTMAYL-------TAQLCSNEHDE 538
            :|:   .|.:|       :|.||..|...||.||:..|:::..:.:|       .|.:|      
plant   511 KEK---SSTLGKSYIQQIILKLLVTWTVDCPTAVQCFLDSRHHLTFLLELVTDPAATVC------ 566

  Fly   539 REFLVQGMCAFLMGLCIQFNDNSLPGQKREDISQLIIKRIGQESFCSKLAEVSRHEAYSRACKQA 603
                ::|:.:.|:|.|:.:|.:...|:....:...:.:::|..|:.||..|:.....:|.:.|..
plant   567 ----IRGLASILLGECVIYNKSIENGKDAFSVVDAVGQKMGLTSYFSKFEEMQNSFIFSPSKKPP 627

  Fly   604 Q-----IRAKSAGELLLD--FEYCKLYKGLEALIAKLVSGFDVDGIELTELTLSSEASALVSQYK 661
            |     .|..:..|..::  .|..::.||.|. ...|:|.||...|            .||...:
plant   628 QGYKPLTRTPTPSEAEINEVDEVDEMVKGNED-HPMLLSLFDASFI------------GLVKSLE 679

  Fly   662 GIIRGMDAQIQALQQSSKELEQENAELKEKLGEEQS-----LKA----------QLLDQNTLLKA 711
            |.||  :..:....:...|:....|:|::|.||.:.     |||          .||.:|..| |
plant   680 GNIR--ERIVDVYSRPKSEVAVVPADLEQKSGENEKDYINRLKAFIEKQCSEIQNLLARNAAL-A 741

  Fly   712 QLGASTGQVQSAQGAEATPPNEEELNAARYQANMYFAENIRLTKELETLRQQLSAEKQSADAAQD 776
            :..||:|:.:.:||:|..                  |..:....::|::|::|....|..:..:.
plant   742 EDVASSGRNEQSQGSEQR------------------ASTVMDKVQMESIRRELQETSQRLETVKA 788

  Fly   777 SLAAMQKDQEDLLELLADQEAKLTRYEEAGSTNTLPTSN--VAPSVPA-AGGGSPI 829
            ..|.::.:......:.|..|..|....:|  .|:|..:|  :...|.: .||.||:
plant   789 EKAKIESEASSNKNMAAKLEFDLKSLSDA--YNSLEQANYHLEQEVKSLKGGESPM 842

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p115NP_572417.1 Arm_vescicular 275..334 CDD:465861 13/64 (20%)
Uso1_p115_head 361..632 CDD:461460 71/316 (22%)
Uso1_p115_C 690..832 CDD:461461 35/158 (22%)
GC6NP_566820.1 Uso1_p115_head 372..683 CDD:461460 79/342 (23%)
Uso1_p115_C 788..903 CDD:461461 13/57 (23%)

Return to query results.
Submit another query.