DRSC/TRiP Functional Genomics Resources

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Protein Alignment p115 and uso1

DIOPT Version :9

Sequence 1:NP_001284992.1 Gene:p115 / 31698 FlyBaseID:FBgn0040087 Length:836 Species:Drosophila melanogaster
Sequence 2:NP_956449.1 Gene:uso1 / 393124 ZFINID:ZDB-GENE-040426-688 Length:956 Species:Danio rerio


Alignment Length:931 Identity:428/931 - (45%)
Similarity:575/931 - (61%) Gaps:137/931 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEFLKSGIKTVLGSTEPGQQPSAAETVEKLVDRVYSSTLLEDRRDACRALKALSRKYRIEVGAQG 65
            |:||:.    |:||...|.||:.|||::||.|||.|||||||||||.||||:||:|||:|||...
Zfish     1 MDFLRG----VMGSKPAGPQPTGAETIQKLCDRVASSTLLEDRRDAVRALKSLSKKYRLEVGTMS 61

  Fly    66 MPPLVQVLQNDGQDAEIISYALDTLCNVVTSEEFDEEADNPTVSV-----NVGEQFTEMFIKTPE 125
            |..||::||.|..|.||:.||||||.|:|.::|.:|:.|:...:.     ::|.|||:.||:.||
Zfish    62 MDHLVRILQTDRSDTEILGYALDTLYNIVCNDEEEEQDDSEEENQQKQEDDLGAQFTDKFIQEPE 126

  Fly   126 HVTLVMGYLDEYDFRVRRAAIQLITSLISNKTRELQDLILVSPMGVSKLMDLLTDSREVIRNDVL 190
            ::||::..|:|:||.||...::|:|:|:.::..::|.::||||||||:|||||.|||||||||.|
Zfish   127 NITLLLTLLEEFDFHVRWPGVKLLTALLKSQCAQVQGIVLVSPMGVSRLMDLLADSREVIRNDGL 191

  Fly   191 LLLIELTKGNSNIQKIVAFENAFDRLFEIVREEGCSDGGIVVEDCLILLLNLLKNNSSNQQFFKE 255
            |||.:|||||:.|||||||||||:||.:|:.|||.|||||||||||:|||||||||||||.||||
Zfish   192 LLLQQLTKGNAAIQKIVAFENAFERLLDIITEEGSSDGGIVVEDCLLLLLNLLKNNSSNQNFFKE 256

  Fly   256 GSYIQRLSPMFELSQDAEEVGWSPQKVSNFHCLLQVVRALVTPSNQQQVVAACQRVMQKSRLLHA 320
            |||||::.|.||:..|  ..|||.|||:|.|.:||:||.||:|.|.....|:||:.|.:..||..
Zfish   257 GSYIQKMKPWFEVGDD--NSGWSAQKVTNLHLMLQLVRVLVSPVNSPGATASCQKAMFQCGLLQQ 319

  Fly   321 LCEILMSSGVPADILTETINAVAEVVRGDRDNQDELGRVMAPSSPPRPAIVVLLMSMINEKQLLA 385
            ||.|||::||||||||||||.|:||:||...|||....|.|||:|||||||||||||:||:|...
Zfish   320 LCTILMATGVPADILTETINTVSEVIRGSEVNQDYFASVNAPSNPPRPAIVVLLMSMVNERQPFV 384

  Fly   386 LRCAVLYCFECFLYRNADGQRAVVQTLLPSSASDVSALSTGQLLCTGLFSTDALANWFSAVALMH 450
            |||||||||:||||:|..||..:|.|||||:. |.:::|.|||||.||||.|:|:||.:||||.|
Zfish   385 LRCAVLYCFQCFLYKNQKGQGEIVATLLPSTI-DANSISAGQLLCGGLFSADSLSNWCAAVALAH 448

  Fly   451 SLVENVALKEELLRVLLATPGGQKPITLLEQCTNLMQQ------ERYRLQSKVGLLMLLSLWLAH 509
            :|.:|:..||:||||.|||..|:.|::||:||||::.|      ...|:|:||||||||..|:::
Zfish   449 ALQDNLTQKEQLLRVQLATSLGKPPVSLLQQCTNILSQGDKLNRRGSRVQTKVGLLMLLCTWISN 513

  Fly   510 CPGAVKALLETQGTMAYLTAQLCSN-EHDEREFLVQGMCAFLMGLCIQFNDNSLPGQKREDISQL 573
            ||.||...|..|..:.:||.|:..| ..|||  ||||:||.|:|:||.:|||||....:|.:.||
Zfish   514 CPIAVMHFLHNQDNVPFLTGQISENLGEDER--LVQGLCALLLGICIYYNDNSLENYTKEKLKQL 576

  Fly   574 IIKRIGQESFCSKLAEVSRHEAYSRACKQAQIRAKSAGELLLDFEYCKLYKGLEALIAKLV--SG 636
            |.||||:|:|..|||.:::||.||||.::.|....:...:|.|.|:.||.|.||.:|.|.|  |.
Zfish   577 IEKRIGKENFVEKLAFITKHELYSRAAQKPQPAFSTPEHMLFDHEFTKLVKELEGMITKAVLRSS 641

  Fly   637 FDVDGIELTELTLSSEASALVSQYKGIIRGMDAQIQAL--------------------------- 674
            .:....|..:.||....| :|:|||.:||..|:||..|                           
Zfish   642 EEEKKEEEVKKTLEQHDS-IVTQYKELIREQDSQINELKKQVTALTSQTENLESTITQQLSQIQQ 705

  Fly   675 ----------------QQSSKELE---------QENAELKEKLGE----EQSLKAQLLDQNTL-- 708
                            ||:..:.|         :|.::|:|:|.|    .|.|:.||.::::|  
Zfish   706 HKDQYNILKLKLGKDTQQAGNQAEAAHVNGLQPEELSQLRERLEEVQRQNQLLQTQLTEKDSLIT 770

  Fly   709 --------------------------LKAQLGASTGQVQSAQ--------GAE---ATPPNE--- 733
                                      |||||.:.|.::...|        |:|   |.|..|   
Zfish   771 SLKAEGVPSVEDSTSEVTELRKEVEGLKAQLQSQTAEITQLQNERQELLRGSEPTVAVPAEESVY 835

  Fly   734 -EELNAARYQANMYFAENIRLTKELET-LRQQLSAEKQSADAA-------------QDSLAAMQK 783
             |::.....:.:....||.:|..|::| |..:.|.||..|.|.             |..:...:|
Zfish   836 KEKIAELESRLSAQTTENQKLKGEVKTLLESKESMEKDLASATSTSAILQAEKNKLQQEVQESKK 900

  Fly   784 DQEDLLELLADQEAKLTRYEE 804
            :|:|||.|||||:.|:...::
Zfish   901 EQDDLLMLLADQDQKILNLKQ 921

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p115NP_001284992.1 Uso1_p115_head 354..632 CDD:309827 151/284 (53%)
Uso1_p115_C 690..832 CDD:309829 44/176 (25%)
uso1NP_956449.1 Uso1_p115_head 351..637 CDD:282693 154/288 (53%)
COG1340 648..934 CDD:224259 63/275 (23%)
TBPIP <736..818 CDD:284512 17/81 (21%)
Uso1_p115_C 831..932 CDD:282695 25/91 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595991
Domainoid 1 1.000 322 1.000 Domainoid score I1196
eggNOG 1 0.900 - - E1_KOG0946
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2754
Inparanoid 1 1.050 737 1.000 Inparanoid score I586
OMA 1 1.010 - - QHG55450
OrthoDB 1 1.010 - - D1273987at2759
OrthoFinder 1 1.000 - - FOG0004607
OrthoInspector 1 1.000 - - oto38727
orthoMCL 1 0.900 - - OOG6_103848
Panther 1 1.100 - - LDO PTHR10013
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1694
SonicParanoid 1 1.000 - - X3226
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1716.800

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