DRSC/TRiP Functional Genomics Resources

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Protein Alignment p115 and uso1

DIOPT Version :9

Sequence 1:NP_001284992.1 Gene:p115 / 31698 FlyBaseID:FBgn0040087 Length:836 Species:Drosophila melanogaster
Sequence 2:XP_004911135.2 Gene:uso1 / 100488011 XenbaseID:XB-GENE-1013306 Length:960 Species:Xenopus tropicalis


Alignment Length:939 Identity:415/939 - (44%)
Similarity:559/939 - (59%) Gaps:145/939 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEFLKSGIKTVLGSTE-PGQQPSAAETVEKLVDRVYSSTLLEDRRDACRALKALSRKYRIEVGAQ 64
            |.||:.    |:|..: .|.|.|..:|::||.|||.|:|||:|||||.||||:||:|||.:|..|
 Frog     1 MNFLRG----VMGGQQTSGAQQSGTQTIQKLCDRVASATLLDDRRDAVRALKSLSKKYRFDVATQ 61

  Fly    65 GMPPLVQVLQNDGQDAEIISYALDTLCNVVTS---EEFDEEADNPTVSV-NVGEQFTEMFIKTPE 125
            .|..|:.|||.|..|:|||.||||||.|::::   |..:.|.:|..::. ::|.||:|.||...|
 Frog    62 AMDHLINVLQTDRSDSEIIGYALDTLYNIMSNDADETAESEDENQQIAPDDLGVQFSETFINQQE 126

  Fly   126 HVTLVMGYLDEYDFRVRRAAIQLITSLISNKTRELQDLILVSPMGVSKLMDLLTDSREVIRNDVL 190
            ::||::..|:|:||.||...::|:|:|:.::..::|..:||||||||:|||||.|||||||||.|
 Frog   127 NITLLLSLLEEFDFHVRWPGVKLLTTLLKHQGPQVQQTVLVSPMGVSRLMDLLDDSREVIRNDGL 191

  Fly   191 LLLIELTKGNSNIQKIVAFENAFDRLFEIVREEGCSDGGIVVEDCLILLLNLLKNNSSNQQFFKE 255
            |||.:|||.|:.||||||||||::||.:|:.|||.|||||||||||:||.||||.|:|||.||||
 Frog   192 LLLQQLTKSNAAIQKIVAFENAYERLLDIITEEGSSDGGIVVEDCLLLLQNLLKYNNSNQNFFKE 256

  Fly   256 GSYIQRLSPMFELSQDAEEVGWSPQKVSNFHCLLQVVRALVTPSNQQQVVAACQRVMQKSRLLHA 320
            ||||||:.|.||:..|  ..|||.|||:|.|.:||:||.||:|.|......:||:.|.:..||..
 Frog   257 GSYIQRMKPWFEVGDD--NSGWSAQKVTNLHLMLQLVRVLVSPVNPPGATNSCQKSMFQCGLLQQ 319

  Fly   321 LCEILMSSGVPADILTETINAVAEVVRGDRDNQDELGRVMAPSSPPRPAIVVLLMSMINEKQLLA 385
            ||.|||::||||||||||||.|:||:||.:.|||....|.|||:|||||||||||||:||:|...
 Frog   320 LCIILMATGVPADILTETINTVSEVIRGSQVNQDYFASVNAPSNPPRPAIVVLLMSMVNERQPFV 384

  Fly   386 LRCAVLYCFECFLYRNADGQRAVVQTLLPSSASDVSALSTGQLLCTGLFSTDALANWFSAVALMH 450
            |||||||||:||||:|..||..:|.|||||:. |.:|||.|||||.||||||:|:||.:||||.|
 Frog   385 LRCAVLYCFQCFLYKNEKGQGEIVATLLPSTI-DANALSAGQLLCGGLFSTDSLSNWCAAVALAH 448

  Fly   451 SLVENVALKEELLRVLLATPGGQKPITLLEQCTNLMQQ------ERYRLQSKVGLLMLLSLWLAH 509
            :|::|...||:||||.|||..|..|::||:||||::.|      ...::|::|||||||..||.:
 Frog   449 ALLDNATQKEQLLRVQLATSIGNPPVSLLQQCTNILSQGDKLIRRGSKVQTRVGLLMLLCTWLTN 513

  Fly   510 CPGAVKALLETQGTMAYLTAQLCSNEHDEREFLVQGMCAFLMGLCIQFNDNSLPGQKREDISQLI 574
            ||.||...|.....:.:||||:..|..:| |.||||:||.|:|:||.:|||||....::.:.|||
 Frog   514 CPIAVTHFLHNAANVPFLTAQISENLGEE-EHLVQGLCALLLGICIYYNDNSLENNTKDKLKQLI 577

  Fly   575 IKRIGQESFCSKLAEVSRHEAYSRACKQAQIRAKSAGELLLDFEYCKLYKGLEALIAKLVSGFDV 639
            .||||:|:|..||..:::||.||:|.::.|....|...:|.|.|:.||.|.||.:|.|.:.....
 Frog   578 EKRIGKENFTEKLGFITKHEFYSKAAQKPQPTFSSPDHMLFDHEFTKLVKELEVVITKAIYKSSE 642

  Fly   640 DGIELTELTLSSEA-SALVSQYKGIIRGMDAQIQALQQSSKEL----EQENAELKEKLGEEQSLK 699
            :..:..|:..|.|. .::||.||.|||..|.:::..:|:...|    ||..:.:..:||:.|..|
 Frog   643 EDKKEEEVKKSLEQHDSIVSHYKSIIREQDIKMEEFKQTIASLQSTNEQNQSTISLQLGQIQQHK 707

  Fly   700 AQLLDQNTLLKAQLGAST------------------------GQVQ------------------- 721
                ||..|||.|||..:                        |:|:                   
 Frog   708 ----DQYNLLKVQLGKDSQHHGSQNSTTQMNGFQPEDVSRLKGEVEELKRQQDILQGELSEKNVL 768

  Fly   722 ---------SAQGAEATPPNEEELNAARYQANMYFAENIR------------------------- 752
                     ..|..:.|...::||...|.|.::..||..|                         
 Frog   769 IESLQQSQVDGQTDQMTEEIQKELETLRSQLHVQSAEINRLQAERMELLQKTETSGSLSASGDSS 833

  Fly   753 ---------------LTKELETLRQQL-------SAEKQSADAAQDSLAAMQ------------- 782
                           |.||:..|::.|       |:.||..|.||.:.|.:|             
 Frog   834 VNSQSNTEMEQKVAELLKEIAGLKEHLKNQSEEKSSWKQQLDTAQSTAAILQDENQKLKQEVTES 898

  Fly   783 -KDQEDLLELLADQEAKL----TRYEEAG 806
             |:|:|||.|||||:.|:    .|.:|.|
 Frog   899 KKEQDDLLVLLADQDQKIFSLKKRLKELG 927

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p115NP_001284992.1 Uso1_p115_head 354..632 CDD:309827 150/283 (53%)
Uso1_p115_C 690..832 CDD:309829 50/234 (21%)
uso1XP_004911135.2 Arm_vescicular 274..333 CDD:408541 30/58 (52%)
Uso1_p115_head 351..637 CDD:398505 153/287 (53%)
Smc <654..>926 CDD:224117 61/275 (22%)
Uso1_p115_C 836..938 CDD:398507 27/92 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 285 1.000 Domainoid score I1581
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2754
Inparanoid 1 1.050 688 1.000 Inparanoid score I684
OMA 1 1.010 - - QHG55450
OrthoDB 1 1.010 - - D1273987at2759
OrthoFinder 1 1.000 - - FOG0004607
OrthoInspector 1 1.000 - - oto103057
Panther 1 1.100 - - LDO PTHR10013
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3226
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1212.080

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