DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nek2 and HERC1

DIOPT Version :9

Sequence 1:NP_572415.1 Gene:Nek2 / 31696 FlyBaseID:FBgn0029970 Length:735 Species:Drosophila melanogaster
Sequence 2:XP_016878188.1 Gene:HERC1 / 8925 HGNCID:4867 Length:4909 Species:Homo sapiens


Alignment Length:548 Identity:105/548 - (19%)
Similarity:170/548 - (31%) Gaps:203/548 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   313 EDEEEDGVH--PELSSTMFTEQYSFNEGYGQRRLSVTGVFTPDLRSELFYSAKRKIFPAKKLQLS 375
            |.||:..|.  ||..|.:...               ||:.:.|::|:...|:|      .:.:::
Human  2452 ESEEKGDVEQKPESESALDMR---------------TGLTSDDVKSQSTTSSK------SENEIA 2495

  Fly   376 ----DPSLYESIRREERAEERQVELAEERRRKKDQEQQKRD------------------------ 412
                ||:|        .:.|.|.::.|.:|:..:...:..|                        
Human  2496 SFSLDPTL--------PSVESQHQITEGKRKNHEHMSKNHDVAQSEIRAVQLSYLYLGAMKSLSA 2552

  Fly   413 -------QELL------------KEAPSSP--------RALTQNIFDEVLKTRLHAIRAQESLLQ 450
                   .|||            .:..|||        ||..|.:...::|..:.....:.:|..
Human  2553 LLGCSKYAELLLIPKVLAENGHNSDCASSPVVHEDVEMRAALQFLMRHMVKRAVMRSPIKRALGL 2617

  Fly   451 QKLEELQTREQEL--------QLAEQRVQTLERQMQEKLLQQEKHTCSCRQPIAPPIPPRKPAKS 507
            ..||..|....:|        |...:..|.:::|.:|....|:..|         |:.....|.|
Human  2618 ADLERAQAMIYKLVVHGLLEDQFGGKIKQEIDQQAEESDPAQQAQT---------PVTTSPSASS 2673

  Fly   508 HHDDTYCTIELNETSPTVAKLNLATLPAPKS-----LNTLRKVTFKSPQKFVTYGIENMPPPAVK 567
            .......::| :.|:.|....:..|:||.:|     |:.||       |.|.:|     |...|.
Human  2674 TTSFMSSSLE-DTTTATTPVTDTETVPASESPGVMPLSLLR-------QMFSSY-----PTTTVL 2725

  Fly   568 P---AVNPPPTGVPMQMS-----VSSNDSGDSQASSTRRKSILSLFGLSRGSKATSKSLP----- 619
            |   |..||.:.:|...|     ..|..|.|||::....::     .||..|...|.|.|     
Human  2726 PTRRAQTPPISSLPTSPSDEVGRRQSLTSPDSQSARPANRT-----ALSDPSSRLSTSPPPPAIA 2785

  Fly   620 --------SVNQVA------------------------------------QAAATRVQRPPLAV- 639
                    |:.|:|                                    |:.:|...||..|| 
Human  2786 VPLLEMGFSLRQIAKAMEATGARGEADAQNITVLAMWMIEHPGHEDEEEPQSGSTADSRPGAAVL 2850

  Fly   640 ------KPPITQEQPAEVPPVANLWTKEQKKQAFELLAAMNAAEREASGGGVVGSGPGGARRQH- 697
                  ..|...:.|.::|...   ..|.::...|....::..|..|||.|....|.....|:| 
Human  2851 GSGGKSNDPCYLQSPGDIPSAD---AAEMEEGFSESPDNLDHTENAASGSGPSARGRSAVTRRHK 2912

  Fly   698 ---------LRQSVRERNSTLQRNRMRR 716
                     .|.:...|:....||:.||
Human  2913 FDLAARTLLARAAGLYRSVQAHRNQSRR 2940

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nek2NP_572415.1 STKc_Nek2 18..281 CDD:270857
S_TKc 19..281 CDD:214567
HERC1XP_016878188.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.010

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