DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nek2 and AT1G19880

DIOPT Version :9

Sequence 1:NP_572415.1 Gene:Nek2 / 31696 FlyBaseID:FBgn0029970 Length:735 Species:Drosophila melanogaster
Sequence 2:NP_173417.2 Gene:AT1G19880 / 838576 AraportID:AT1G19880 Length:538 Species:Arabidopsis thaliana


Alignment Length:83 Identity:17/83 - (20%)
Similarity:29/83 - (34%) Gaps:20/83 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   387 ERAEERQV-----ELAEERRRKKDQEQQKRDQELLKEAPSSPRALTQNIFDEVLKTRLHAIRAQE 446
            :|.|:.:|     .|.|.....|::....:.|.:.|...|..|               .|.:|..
plant   413 DRLEQLEVYDGKGSLEESVEEVKEETLAPKQQAVTKRGASKKR---------------KASKASS 462

  Fly   447 SLLQQKLEELQTREQELQ 464
            ...|...|:...:|:|:|
plant   463 DSEQDSDEDNSDKEKEVQ 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nek2NP_572415.1 STKc_Nek2 18..281 CDD:270857
S_TKc 19..281 CDD:214567
AT1G19880NP_173417.2 ATS1 38..384 CDD:227511
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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