DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nek2 and NEK3

DIOPT Version :9

Sequence 1:NP_572415.1 Gene:Nek2 / 31696 FlyBaseID:FBgn0029970 Length:735 Species:Drosophila melanogaster
Sequence 2:NP_001330383.1 Gene:NEK3 / 832912 AraportID:AT5G28290 Length:568 Species:Arabidopsis thaliana


Alignment Length:652 Identity:170/652 - (26%)
Similarity:263/652 - (40%) Gaps:158/652 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LQDYEVLAVMGNGSFGTCYKVRDKSTGELFAWKGMNYDELDEAKCDALVSEISVLRQLQHPNIVQ 80
            ::.||||..:|.||||:...||.|...:|:..|.:...........:...|:.::.::::|.||:
plant     1 MEHYEVLEQIGKGSFGSALLVRHKHEKKLYVLKKIRLARQTGRTRRSAHQEMELISKIRNPFIVE 65

  Fly    81 YYHHLVNREAKSVYIVMECCAGGDLAQIVQRARSQRQRFEEPYIWRVLFQLCRALQVCHNKIPNG 145
            |....|.:.. .|.||:..|.|||:|:.:::|..  ..|.|..:.:.|.||..||:..|    ..
plant    66 YKDSWVEKGC-YVCIVIGYCKGGDMAEAIKKANG--VEFSEEKLCKWLVQLLMALEYLH----AS 123

  Fly   146 TILHRDIKPANIFLDAAGNAKLGDFGLARMLRRDQSFAASFVGTPHYMSPELVKGRKYDRKSDVW 210
            .|||||:|.:||||....:.:|||||||::|..| ..|:|.||||.||.|||:....|..|||:|
plant   124 HILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSD-DLASSVVGTPSYMCPELLADIPYGSKSDIW 187

  Fly   211 AVGCLVYEMCALRPPFRGRAFDQ--LSEKIAQGEFSRIPAIYSTDLQEIIAFMLAVDHEQRPGIE 273
            ::||.:|||.||:|.|  :|||.  |..:|.:...:.:||.|||..:.::..||..:.|.||...
plant   188 SLGCCMYEMTALKPAF--KAFDMQGLINRINRSIVAPLPAQYSTAFRSLVKSMLRKNPELRPSAS 250

  Fly   274 VIIRHPLVVRNISELDGKFPILVDSGEDFYTLPSGARLFEDEEEDGVHPELSSTMFTEQYSFNEG 338
            .::|.||:...:.::     :|..|..:..||||.:                             
plant   251 DLLRQPLLQPYVQKV-----LLKLSFREHDTLPSES----------------------------- 281

  Fly   339 YGQRRLSVTGVFTPDLRSELFYSAKRKIFPAKKLQLSDPSLYESIRREERAEERQVELAEERRRK 403
              :||.|              |..:||....|.:... ||.:...:.:..:..:.|.....|.|.
plant   282 --ERRSS--------------YPQQRKRTSGKSVSFG-PSRFGVDQEDSVSSVKPVHTYLHRHRP 329

  Fly   404 KDQEQQKRDQELLKEAPSSPRALTQNIFDEVLKTRLHAIRAQESLLQQKLEELQTREQELQLAEQ 468
            .|                    |:.|....|:..|    .|..|::....:.:..|..       
plant   330 VD--------------------LSANDTSRVVVRR----PAVSSVVSNSSKYVPVRSN------- 363

  Fly   469 RVQTLERQMQEK---LLQQEKHTCSCRQPIAPPIPPRKPAKSHHDDTYCTIELNETSPTVAKLNL 530
                     |.|   ||:....|.....||:     :||||...|..|        .|.:..|:.
plant   364 ---------QPKSGGLLKPAVVTRRASLPIS-----QKPAKGTKDSLY--------HPNIGILHQ 406

  Fly   531 ATLPAPKSLNTLRKVTFKSPQ----KFVTYGIENMP-PPAVKP-------AVNPPPTGVPMQMSV 583
            ...|         .|:..||:    ||.....|.|| .|.|:.       :.:|||. .|:..|:
plant   407 LNSP---------DVSVNSPRIDRIKFPLASYEEMPFIPVVRKKKGSSRGSYSPPPE-PPLDCSI 461

  Fly   584 SSNDSGDSQASSTRRKSILSLFGLSRGSKATSKSLPSVNQVAQAAATRVQRPPLAVKPPITQEQP 648
            :.    |.......|::...|...:..:.|:|:        |.:.|:|.||     ..|.:..|.
plant   462 TK----DKFTLEPERETKSDLSDQNATAGASSR--------ASSGASRRQR-----FDPSSYRQR 509

  Fly   649 AE 650
            ||
plant   510 AE 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nek2NP_572415.1 STKc_Nek2 18..281 CDD:270857 98/264 (37%)
S_TKc 19..281 CDD:214567 98/263 (37%)
NEK3NP_001330383.1 STKc_Nek 3..258 CDD:270855 98/264 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 173 1.000 Inparanoid score I1512
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000168
OrthoInspector 1 1.000 - - mtm947
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.960

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