DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nek2 and AT5G11580

DIOPT Version :9

Sequence 1:NP_572415.1 Gene:Nek2 / 31696 FlyBaseID:FBgn0029970 Length:735 Species:Drosophila melanogaster
Sequence 2:NP_568250.1 Gene:AT5G11580 / 831030 AraportID:AT5G11580 Length:553 Species:Arabidopsis thaliana


Alignment Length:471 Identity:92/471 - (19%)
Similarity:153/471 - (32%) Gaps:165/471 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 MDFSQKTL-----QDYEVLAVMGNGSFGTCYKVRDKSTGELFAWKGMNYDEL----DEAKCDALV 64
            :||..:|:     .|..|:|::|.|..   :|........|::|...::.:|    .|::.    
plant   192 LDFHGRTVLKVACGDEHVVALVGPGDI---HKDNSYDVSVLYSWGNNHHGQLGLGDGESRA---- 249

  Fly    65 SEISVLRQLQHPNIVQYYHHLVNREAKSVYIVMECCAGGDLAQIVQRARSQRQRFEEPYI-WRVL 128
                      .|..|:.::   .:...:||.:  .|.....|.:..|..:.:    .|.| |...
plant   250 ----------RPQTVETFN---QKSGLTVYDI--ACGAHHTALLTYRKETPK----GPSICWTFG 295

  Fly   129 FQLCRALQVCHNKIPNGTILHRDIKPANI---FLDAAGNAKL--GDFGLARMLRRDQSFAASFVG 188
            |.            .||.:.||..|.:::   ..|...:|.|  .|.||         |..|.|.
plant   296 FG------------ENGQLGHRSNKSSSLPEPVSDLPEHAYLVSVDCGL---------FHTSVVS 339

  Fly   189 TPHYMSPELVKGRKYDRKSDVWAVGCLVYEMCALRPPFRGRAF-------------DQLSEKIAQ 240
            :..|                ||:.|.           .||...             |.:..||:.
plant   340 SEGY----------------VWSWGM-----------ERGLGLCPDVNFTEVEAGDDSVPRKISG 377

  Fly   241 GEFS-RIPAIYSTDLQEIIAFMLAVD--------HEQRPGIEVIIRHPLVVRNISELDGKFPILV 296
            |... |.|...|......:   |.||        ...|.|:       |...|:|  |...|.||
plant   378 GSSRFRDPVQVSCGAAHTV---LVVDGGYKLWSWGRGRNGV-------LGTGNVS--DCYVPTLV 430

  Fly   297 ----DSGEDFYTLPSGARLFEDEEEDGVHPELSSTMFTEQYS-------FNEGYGQRR-----LS 345
                :...:...:|...:....||...:..:|   |..|:|:       |.:.:.:..     |.
plant   431 FWPNELKPEKEEVPDDGKSASTEEIKRLESKL---MVMERYASILHGSIFGKPFNEEEDIPYSLR 492

  Fly   346 VTGVFTPDLRSELFYSAKRKIFPAKKLQLSDPSLYESIRREERAEERQVELAEERRRKKDQEQQK 410
            |:|.|  |:..|.          .:.|:.:|.|   .:.|.:...|..:      .|.||:..|:
plant   493 VSGYF--DMGKEW----------GEMLESADKS---QLMRLQAFYEDMI------GRVKDKVLQR 536

  Fly   411 RDQELLKEA--PSSPR 424
            |.||::|:.  .|:|:
plant   537 RIQEIMKDCLQSSAPK 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nek2NP_572415.1 STKc_Nek2 18..281 CDD:270857 53/294 (18%)
S_TKc 19..281 CDD:214567 52/293 (18%)
AT5G11580NP_568250.1 ATS1 27..443 CDD:227511 63/336 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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