DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nek2 and AT2G32850

DIOPT Version :9

Sequence 1:NP_572415.1 Gene:Nek2 / 31696 FlyBaseID:FBgn0029970 Length:735 Species:Drosophila melanogaster
Sequence 2:NP_850199.1 Gene:AT2G32850 / 817846 AraportID:AT2G32850 Length:670 Species:Arabidopsis thaliana


Alignment Length:774 Identity:173/774 - (22%)
Similarity:296/774 - (38%) Gaps:187/774 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EESAGMD--FSQKTLQDYEVLAVMGNGSFGTCYKVRD-KSTGELFAWKGMNYDELDEAKCDALVS 65
            :|.||::  |.:......:|..|:..|.|.:.|..:| ....:.:|.|.|..:  ||...:.::.
plant    10 KEPAGLEGRFLEIGNLKVQVRNVIAEGGFSSVYLAQDVNHASKQYALKHMICN--DEESLELVMK 72

  Fly    66 EISVLRQLQ-HPNIVQYYHHLV---NREAKSVYIVMECCAGGDLAQIVQRARSQRQRFEEPYIWR 126
            |||||:.|: |||:|..|.|.:   .|..|...:.|:.| |..|..:::...:  ..|||.....
plant    73 EISVLKSLKGHPNVVTLYAHGILDMGRNKKEALLAMDFC-GKSLVDVLENRGA--GYFEEKQALT 134

  Fly   127 VLFQLCRALQVCHNKIPNGTILHRDIKPANIFLDAAGNAKLGDFGLA----RMLRRDQSFAASFV 187
            :...:|.|:...|.:.|.  |.|||:|..|:.|.:.|..||.|||..    ::..|     |..:
plant   135 IFRDVCNAVFAMHCQSPR--IAHRDLKAENLLLSSDGQWKLCDFGSVSTNHKIFER-----AEEM 192

  Fly   188 G----------TPHYMSPE---LVKGRKYDRKSDVWAVGCLVYEMCALRPPFRGRAFDQLSE-KI 238
            |          ||.|.:||   |.:......|.|:||:|||::.:|..:     .|||..|: :|
plant   193 GIEEDNIRKYTTPTYRAPEMWDLFRREMISEKVDIWALGCLLFRICYFK-----NAFDGESKLQI 252

  Fly   239 AQGEFSRIPAI--YSTDLQEIIAFMLAVDHEQRPGIEVI---IRHPLVVRNISELDGKFPILVDS 298
            ..|.: |||..  ||..:.::|..||....::||.|..|   :...|.......|..:.|.:..:
plant   253 LNGNY-RIPESPKYSVFITDLIKEMLQASPDERPDITQIWFRVNEQLPANLQKSLPDRPPEMQST 316

  Fly   299 G-----EDFYTLPSGARLF-------EDEEEDGVHPELSSTMFTEQYSFNEGYGQRRLSVTGVFT 351
            |     ....|.||.|...       ...|.|...| |.:...|:.            :.|.|.:
plant   317 GVHDGSSKSATKPSPAPRRSPPPPPPSSGESDSGGP-LGAFWATQH------------AKTSVVS 368

  Fly   352 PDLRSELFYSAKRKIFPAKKLQLSDPSLYESIRREERAEERQVELAEERR---RKKDQE---QQK 410
            .|          .|..|......|:.|..|.:|.:....::...:..|.|   |.||.|   .||
plant   369 ED----------NKNMPKFDEPNSNTSKSERVRVDSHQPKKPSPVRGEARGIQRNKDLETTISQK 423

  Fly   411 RDQELLKEAPSSPRALTQNIFDEVLKT-----------------RLHAIRAQESLLQQKLEELQT 458
                  ...|::...:|:...|:...:                 :..|:.|:...|:.:|::.::
plant   424 ------NTTPAAANNMTRVSKDDAFNSFVADFDTTKFDNGNKPGKEEALEAEIQRLKDELKQTKS 482

  Fly   459 REQELQLAEQRVQTLERQMQEKLLQQEKHTCSCRQPIAPPIPPRKPAKSHHDDTYCTIELNETSP 523
            .:.|:....:::..:.|..::: ||..|.|.:.:.  |.|.|.|..::            |:.||
plant   483 EKAEITAKFEKLSAICRSQRQE-LQDLKQTLASKS--ASPSPSRDSSQ------------NQPSP 532

  Fly   524 TVAKLNLATLPAPKSLNTLRKVTFKSPQKFVTYGIENMPPPAVKPAVNPPPTGVPMQMSVSSNDS 588
                 .:.::.:..|.:.:....::..|....:                         |..|:|:
plant   533 -----GMHSMSSTPSRDKMEGTMWELQQDRSNW-------------------------STGSSDT 567

  Fly   589 GDSQASSTRRKSILSLFGLSRGSKAT-SKSLPSVNQVAQAAATRVQRPPLAVKPPITQEQPAEVP 652
            ...|..|...|.::.  ..|:|:..| ::|:.:.::.|.||.|:...|                 
plant   568 NSWQPFSDEAKPVME--SASKGNNNTINQSVRTRSKPASAAGTQGFEP----------------- 613

  Fly   653 PVANLWTKEQKKQAFELLAAMNAAEREASG-GGVVGSGPGGARRQHLRQSVRERNSTLQ 710
                 |..|  .::|. .||.:||...||| ...:|||...::| :....:||...|.|
plant   614 -----WGFE--TESFR-AAATSAAATSASGTQRSMGSGNSTSQR-YGNSKMRENQKTAQ 663

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nek2NP_572415.1 STKc_Nek2 18..281 CDD:270857 84/290 (29%)
S_TKc 19..281 CDD:214567 84/289 (29%)
AT2G32850NP_850199.1 STKc_GAK_like 26..299 CDD:270887 84/290 (29%)
Macoilin <261..>559 CDD:370635 61/346 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.