DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nek2 and AT4G14368

DIOPT Version :9

Sequence 1:NP_572415.1 Gene:Nek2 / 31696 FlyBaseID:FBgn0029970 Length:735 Species:Drosophila melanogaster
Sequence 2:NP_001154232.2 Gene:AT4G14368 / 7922506 AraportID:AT4G14368 Length:1106 Species:Arabidopsis thaliana


Alignment Length:281 Identity:58/281 - (20%)
Similarity:86/281 - (30%) Gaps:107/281 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   487 HTCSCRQPIAPPIPPRKPAKSHH--DDTYCTIELNET--SPTVAKLNLAT--------------- 532
            |.||.::.:...:.| .|.|.|.  |..|..::..|:  :..||..|..|               
plant   649 HACSSKKALKAALAP-TPGKPHRVCDACYTKLKAGESGYNSNVANRNSTTPTRSLDGTGRPDRDI 712

  Fly   533 -----LPAPK-------------------------SLNTLRKVTFKSPQKFVTYGIENMPPPAVK 567
                 |.:||                         :|..||.|.|.|...    .|:|...|...
plant   713 RSSRILLSPKTEPVKYSEVRSSRSESSIVRASQVPALQQLRDVAFPSSLS----AIQNAFKPVAS 773

  Fly   568 PAVNPPPTGVPMQMSVSSNDSGDSQASSTRRKSILSLFGLSRGSKATSK---------------S 617
            .:.:..|:|           :..|:.||..|.|     |.|||...|.|               .
plant   774 SSTSTLPSG-----------TRSSRISSPPRSS-----GFSRGMIDTLKKSNGVINKEMTKLQSQ 822

  Fly   618 LPSVNQVAQAAATRVQR--------PPLAVKPPITQEQPAEVPPVANLWTKEQKK---------Q 665
            :.::.:......|.:||        ..||||.....:...||........:|.|:         :
plant   823 IKNLKEKCDNQGTEIQRLKKTAREASDLAVKHSSKHKAATEVMKSVAEHLRELKEKLPPEVSRCE 887

  Fly   666 AFELL-----AAMNAAEREAS 681
            |||.:     |.:||:|...|
plant   888 AFESMNSQAEAYLNASEASES 908

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nek2NP_572415.1 STKc_Nek2 18..281 CDD:270857
S_TKc 19..281 CDD:214567
AT4G14368NP_001154232.2 PH_PLC_plant-like 17..128 CDD:270171
RCC1 289..337 CDD:278826
RCC1 340..391 CDD:278826
RCC1 395..444 CDD:278826
RCC1 459..506 CDD:278826
RCC1 509..558 CDD:278826
RCC1 563..607 CDD:278826
FYVE 613..680 CDD:214499 9/31 (29%)
DASH_Spc19 <812..885 CDD:285487 11/72 (15%)
BRX_N 853..887 CDD:290432 5/33 (15%)
BRX 964..>994 CDD:285568
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.