DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nek2 and hectd3

DIOPT Version :9

Sequence 1:NP_572415.1 Gene:Nek2 / 31696 FlyBaseID:FBgn0029970 Length:735 Species:Drosophila melanogaster
Sequence 2:NP_001072497.1 Gene:hectd3 / 779952 XenbaseID:XB-GENE-5937967 Length:845 Species:Xenopus tropicalis


Alignment Length:304 Identity:58/304 - (19%)
Similarity:103/304 - (33%) Gaps:82/304 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   246 IPAIYSTDLQEIIAFMLAVDHEQRPGIEVIIRH----------PLVVRNISELDGKFPI------ 294
            :|.:|       |...:||:|...|.::...:.          .|..::...||.::|:      
 Frog   455 MPCLY-------INRRIAVEHRDNPSLDPSYKKTVFSQVYEGLKLTDKSEKPLDYRWPVRYEQWW 512

  Fly   295 --------LVDSGEDFYTLPSGARLFEDEEEDGVHPEL--SSTMFTEQYSF-----NEGYGQRRL 344
                    ::|.|..          |.|...| :..||  ||........|     |:|.|....
 Frog   513 ECKFIAEGIIDQGGG----------FRDSLAD-ISEELCPSSADIPVPLPFFVRTSNQGNGTGEA 566

  Fly   345 SVTGVFTPDLR--------SELFYSAKR-KIFPAKKLQLSDPSL-YESIRREERAEERQVELAEE 399
            ....|..|..:        .:|..:|.| |.|    |.|:.|.| ::.:..||.:..:.....:.
 Frog   567 QDMYVPNPSCKDLAKYEWIGQLMGAALRGKEF----LVLALPGLVWKQLTGEEVSWSKDFPAVDS 627

  Fly   400 RRRKKDQEQQKRDQELLKEAPSSPRALTQNIFDE--------------VLKTRLHAIRAQESLLQ 450
            ...|..:..:..|:|..:...|.....|..:.|:              :.|.|:..||..:   :
 Frog   628 LLVKLLEMMELMDEETFEFKFSGELTYTTVLSDQKMVELVPGGSNISVLYKDRVEFIRMVQ---K 689

  Fly   451 QKLEELQTREQELQLAEQRVQTLERQMQEKLLQQEKHTCSCRQP 494
            .:|||  ::||...|....::.:.:.:.:.|..||.....|..|
 Frog   690 ARLEE--SKEQIGALQAGLLKVVPQAVLDLLTWQELEKRVCGDP 731

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nek2NP_572415.1 STKc_Nek2 18..281 CDD:270857 7/44 (16%)
S_TKc 19..281 CDD:214567 7/44 (16%)
hectd3NP_001072497.1 APC10-HECTD3 222..355 CDD:176487
HECTc 512..837 CDD:421431 47/240 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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