DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nek2 and si:ch211-285c6.3

DIOPT Version :10

Sequence 1:NP_572415.1 Gene:Nek2 / 31696 FlyBaseID:FBgn0029970 Length:735 Species:Drosophila melanogaster
Sequence 2:XP_685228.2 Gene:si:ch211-285c6.3 / 557131 ZFINID:ZDB-GENE-040724-148 Length:543 Species:Danio rerio


Alignment Length:233 Identity:74/233 - (31%)
Similarity:127/233 - (54%) Gaps:28/233 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 EISVLRQLQHPNIVQYYHHLVNREAKSVYIVMECCAGGDLAQIVQRARSQRQRFEEPYI--WRVL 128
            :::.|..|.||:||  :|..:.|:...:|:|::.|.|||||:.:::|..|   |.|..|  |.| 
Zfish    45 DVNFLLHLDHPHIV--HHKEIIRDGDDLYLVLDHCEGGDLAEKIKQATGQ---FSEKEILDWTV- 103

  Fly   129 FQLCRALQVCHNKIPNGTILHRDIKPANIFLDAAGNAKLGDFGLARMLRRDQSFAASFVGTPH-- 191
             |:|.||:..|::    .|||:|::|.::...|.|..:||:|        |:.|  :.|.|..  
Zfish   104 -QICMALKHLHDQ----QILHKDLQPKSLLFTACGTIRLGEF--------DKWF--TDVQTAETE 153

  Fly   192 ---YMSPELVKGRKYDRKSDVWAVGCLVYEMCALRPPFRGRAFDQLSEKIAQGEFSRIPAIYSTD 253
               |.:||.:....|..||::|.:||::.|||.|:..|.....|::.:||.:..:..:|..:|.|
Zfish   154 SLAYFAPENLHDTSYYEKSEIWRLGCIICEMCTLKKAFSSGNTDEIIKKICRSSYEHLPTNFSED 218

  Fly   254 LQEIIAFMLAVDHEQRPGIEVIIRHPLVVRNISELDGK 291
            |||:|...|.|:...||.:..|:..|.:::::.|:..|
Zfish   219 LQELIKDTLQVNPADRPSVSEILMRPFIIKHLREMSKK 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nek2NP_572415.1 STKc_Nek2 18..281 CDD:270857 72/221 (33%)
si:ch211-285c6.3XP_685228.2 Protein Kinases, catalytic domain 23..246 CDD:473864 72/221 (33%)
ApoL <260..>347 CDD:461657
Blue background indicates that the domain is not in the aligned region.

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