DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nek2 and nek3

DIOPT Version :9

Sequence 1:NP_572415.1 Gene:Nek2 / 31696 FlyBaseID:FBgn0029970 Length:735 Species:Drosophila melanogaster
Sequence 2:NP_001005692.1 Gene:nek3 / 448198 XenbaseID:XB-GENE-973192 Length:494 Species:Xenopus tropicalis


Alignment Length:401 Identity:117/401 - (29%)
Similarity:190/401 - (47%) Gaps:70/401 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LQDYEVLAVMGNGSFGTCYKVRDKSTGELFAWKGM----NYDELDEAKCDALVSEISVLRQLQHP 76
            ::.|.::.|:|.||||....|..||:...:..|.:    ::..:::::.:|:     :|..::|.
 Frog     1 MEQYNIVRVIGEGSFGRALLVCHKSSNHKYVMKEIRLPKSFHAMEDSRKEAV-----LLANMKHS 60

  Fly    77 NIVQYYH------HLVNREAKSVYIVMECCAGGDLAQIVQRARSQRQR-FEEPYIWRVLFQLCRA 134
            |||.:..      ||        |||||.|.||||   :|:.:.|:.| |.|..|.:...|:|.|
 Frog    61 NIVTFQESFEGDGHL--------YIVMEYCQGGDL---LQKIKLQKGRLFTEQTILQWFVQICLA 114

  Fly   135 LQVCHNKIPNGTILHRDIKPANIFLDAAGNAKLGDFGLARMLRRDQSFAASFVGTPHYMSPELVK 199
            :|..|.|    .:||||||..||||..:.|.||||||.||:|....::|.::||||:|:.||:.:
 Frog   115 VQYIHEK----RVLHRDIKSKNIFLTQSCNIKLGDFGSARILTSPAAYACTYVGTPYYVPPEIWE 175

  Fly   200 GRKYDRKSDVWAVGCLVYEMCALRPPFRGRAFDQLSEKIAQGEFSRIPAIYSTDLQEIIAFMLAV 264
            ...|:.|||:|::||::||:|.|:.||:..::..|..||.||.:..:|..||.:|:.:|..|...
 Frog   176 NMPYNNKSDIWSLGCVLYELCTLKHPFQAGSWKNLILKICQGSYKPLPLQYSYELRSLINQMFRK 240

  Fly   265 DHEQRPGIEVIIRHPLVVRNISELDGKFPILVDSGEDFYTLPS-GARLFEDEEEDGVH-----PE 323
            :...||....|:....:.:.|.                 |.|| ...:.:..|..|..     .|
 Frog   241 NPRSRPSASTILSRTALSKLIR-----------------TAPSPKISVGQSPENQGTRNVVATHE 288

  Fly   324 LSSTMFTEQYSFNEGYGQRRLSVTGVFTPDLRSELFYSAKRKIFPAKKLQLS---------DPSL 379
            .|..:|..:|       :...|..|:.....:.|:.::....:..|..|..|         ||:.
 Frog   289 PSPQVFDSRY-------EAETSSPGLQRKQWKKEMSHTVLNNLENASILTTSTAAGNCSETDPNS 346

  Fly   380 YESIRREERAE 390
            .|..|::...|
 Frog   347 QELQRKQWNKE 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nek2NP_572415.1 STKc_Nek2 18..281 CDD:270857 96/273 (35%)
S_TKc 19..281 CDD:214567 96/272 (35%)
nek3NP_001005692.1 PKc_like 3..257 CDD:419665 96/273 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D132059at33208
OrthoFinder 1 1.000 - - FOG0000168
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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